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Series GSE171476 Query DataSets for GSE171476
Status Public on Apr 06, 2021
Title Transcriptome analysis reveals the contribution of glia -derived cues for maintenance of microglia identity in rhesus macaques
Organism Macaca mulatta
Experiment type Expression profiling by high throughput sequencing
Summary We analyzed the transcriptomes of different primary microglia cultures from adult rhesus macaques, and compared them with those of ex vivo microglia
 
Overall design Primary microglia cultured with M-CSF, IL-34, M-CSF + TGFb, IL-34 + TGFb (n=4). Primary microglia cultured with serum + M-CSF, serum (4days) + different serum-free wash out regimes (4, 11 and 18 days), and serum-free medium (22 days) (n=4). Primary microglia cultured with serum + M-CSF, with serum for 4 days and subsequently cultured in serum-free medium for 11 days, and microglia cultured in spheres together with oligodendrocytes and radial glia (n=4). Freshly isolated microglia (ex vivo) (n=4)
 
Contributor(s) Timmerman R, Bajramovic JJ
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Submission date Apr 05, 2021
Last update date Apr 15, 2021
Contact name Raissa Timmerman
E-mail(s) [email protected]
Organization name Biomedical Primate Research Centre
Department Alternatives
Street address Lange Kleiweg 161
City Rijswijk
ZIP/Postal code 2288 GJ
Country Netherlands
 
Platforms (2)
GPL21120 Illumina NextSeq 500 (Macaca mulatta)
GPL27943 Illumina NovaSeq 6000 (Macaca mulatta)
Samples (52)
GSM5226135 SM M-CSF_1
GSM5226136 SM IL-34_1
GSM5226137 SM M-CSF + TGF-b_1
Relations
BioProject PRJNA719784
SRA SRP313472

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE171476_RAW.tar 49.1 Mb (http)(custom) TAR (of TSV, TXT)
GSE171476_Raw_counts_matrix.csv.gz 1.5 Mb (ftp)(http) CSV
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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