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| Status |
Public on Jul 04, 2009 |
| Title |
Heterologous microarrays for the study of drought stress in Musa |
| Platform organisms |
Arabidopsis thaliana; Oryza sativa |
| Sample organism |
Musa sp. |
| Experiment type |
Expression profiling by array
Other
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| Summary |
'Systems-wide' approaches such as microarray RNA-profiling are ideally suited to the study of the complex, overlapping responses of plants to biotic and abiotic stresses. However, commercial microarrays are only available for a limited number of plant species and development costs are so substantial as to be prohibitive for most research groups. Here, we evaluate the use of cross-hybridisation to Affymetrix oligonucleotide GeneChip microarrays to profile the response of the banana (Musa sp.) leaf transcriptome to drought stress using a genomic DNA (gDNA)-based probe-selection strategy to improve the efficiency of detection of differentially expressed Musa transcripts.
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| Overall design |
GeneChip analyses were performed to profile the response of the banana (Musa sp.) leaf transcriptome to drought stress using a genomic DNA (gDNA)-based probe-selection strategy to improve the efficiency of detection of differentially expressed Musa transcripts.
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| Contributor(s) |
Davey MW, Graham NS, Vanholme B, Swennen R, May ST, Keulemans J |
| Citation(s) |
19758430 |
| |
| Submission date |
Jun 26, 2009 |
| Last update date |
Aug 28, 2018 |
| Contact name |
Nottingham Arabidopsis Stock Centre (NASC) |
| E-mail(s) |
[email protected]
|
| Phone |
+44 (0)115 951 3237
|
| Fax |
+44 (0)115 951 3297
|
| URL |
http://arabidopsis.info/
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| Organization name |
Nottingham Arabidopsis Stock Centre (NASC)
|
| Department |
School of Biosciences, University of Nottingham
|
| Street address |
Sutton Bonington Campus
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| City |
Loughborough |
| ZIP/Postal code |
LE12 5RD |
| Country |
United Kingdom |
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| Platforms (2) |
| GPL198 |
[ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array |
| GPL2025 |
[Rice] Affymetrix Rice Genome Array |
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| Samples (4)
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| Relations |
| BioProject |
PRJNA117567 |
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