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GEO accession:
Series GSE163805
Query DataSets for GSE163805
Status
Public on May 23, 2021
Title
A PP2A-Integrator complex fine-tunes transcription by opposing CDK9
Organisms
Drosophila melanogaster
;
Homo sapiens
Experiment type
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
34004147
Submission date
Dec 24, 2020
Last update date
May 23, 2021
Contact name
Stephin J Vervoort
E-mail(s)
[email protected]
Organization name
Peter MacCallum Cancer Centre
Street address
305 Grattan Street
City
Melbourne
ZIP/Postal code
3000
Country
Australia
Platforms (2)
GPL18573
Illumina NextSeq 500 (Homo sapiens)
GPL19132
Illumina NextSeq 500 (Drosophila melanogaster)
Samples (77)
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More...
GSM4987715
THP-1 sgSCR untreated replicate 1
GSM4987716
THP-1 sgSCR untreated replicate 2
GSM4987717
THP-1 sgSCR LPS 1 hour replicate 1
GSM4987718
THP-1 sgSCR LPS 1 hour replicate 2
GSM4987719
THP-1 sgSCR LPS 2 hour replicate 1
GSM4987720
THP-1 sgSCR LPS 2 hour replicate 2
GSM4987721
THP-1 sgSCR LPS 4 hour replicate 1
GSM4987722
THP-1 sgSCR LPS 4 hour replicate 2
GSM4987723
THP-1 sgSCR LPS 8 hour replicate 1
GSM4987724
THP-1 sgSCR LPS 8 hour replicate 2
GSM4987725
THP-1 sgINTS6 untreated replicate 1
GSM4987726
THP-1 sgINTS6 untreated replicate 2
GSM4987727
THP-1 sgINTS6 LPS 1 hour replicate 1
GSM4987728
THP-1 sgINTS6 LPS 1 hour replicate 2
GSM4987729
THP-1 sgINTS6 LPS 2 hour replicate 1
GSM4987730
THP-1 sgINTS6 LPS 2 hour replicate 2
GSM4987731
THP-1 sgINTS6 LPS 4 hour replicate 1
GSM4987732
THP-1 sgINTS6 LPS 4 hour replicate 2
GSM4987733
THP-1 sgINTS6 LPS 8 hour replicate 1
GSM4987734
THP-1 sgINTS6 LPS 8 hour replicate 2
GSM4987735
HT-29 DMSO replicate 1
GSM4987736
HT-29 DMSO replicate 2
GSM4987737
HT-29 DMSO replicate 3
GSM4987738
HT-29 CDK9i replicate 1
GSM4987739
HT-29 CDK9i replicate 2
GSM4987740
HT-29 CDK9i replicate 3
GSM4987741
HT-29 DBK-1154 replicate 1
GSM4987742
HT-29 DBK-1154 replicate 2
GSM4987743
HT-29 DBK-1154 replicate 3
GSM4987744
HT-29 CDK9i + DBK-1154 replicate 1
GSM4987745
HT-29 CDK9i + DBK-1154 replicate 2
GSM4987746
HT-29 CDK9i + DBK-1154 replicate 3
GSM4987747
THP-1 sgSCR CDK9i 0 hours replicate 1
GSM4987748
THP-1 sgSCR CDK9i 0 hours replicate 2
GSM4987749
THP-1 sgSCR CDK9i 2 hours replicate 1
GSM4987750
THP-1 sgSCR CDK9i 2 hours replicate 2
GSM4987751
THP-1 sgSCR CDK9i 6 hours replicate 1
GSM4987752
THP-1 sgSCR CDK9i 6 hours replicate 2
GSM4987753
THP-1 sgINTS6 CDK9i 0 hours replicate 1
GSM4987754
THP-1 sgINTS6 CDK9i 0 hours replicate 2
GSM4987755
THP-1 sgINTS6 CDK9i 2 hours replicate 1
GSM4987756
THP-1 sgINTS6 CDK9i 2 hours replicate 2
GSM4987757
THP-1 sgINTS6 CDK9i 6 hours replicate 1
GSM4987758
THP-1 sgINTS6 CDK9i 6 hours replicate 2
GSM4987759
THP-1 sgSCR - Input DNA
GSM4987760
THP-1 sgSCR DMSO RNAPII CTD4H8
GSM4987761
THP-1 sgSCR CDK9i RNAPII CTD4H8
GSM4987762
THP-1 sgINTS6A DMSO RNAPII CTD4H8
GSM4987763
THP-1 sgINTS6A CDK9i RNAPII CTD4H8
GSM4987764
THP-1 sgSCR DMSO CDK9
GSM4987765
THP-1 sgSCR CDK9i CDK9
GSM4987766
THP-1 sgINTS6A DMSO CDK9
GSM4987767
THP-1 sgINTS6A CDK9i CDK9
GSM4987768
THP-1 sgSCR DMSO INTS11
GSM4987769
THP-1 sgSCR CDK9i INTS11
GSM4987770
THP-1 sgSCR DMSO INTS6
GSM4987771
THP-1 sgSCR CDK9i INTS6
GSM4987772
THP-1 sgSCR DMSO BRD4
GSM4987773
THP-1 sgSCR CDK9i BRD4
GSM4987774
THP-1 sgSCR DMSO RNAPII phospho-CTD Ser2
GSM4987775
THP-1 sgSCR CDK9i RNAPII phospho-CTD Ser2
GSM4987776
THP-1 sgINTS6A DMSO RNAPII phospho-CTD Ser2
GSM4987777
THP-1 sgINTS6A CDK9i RNAPII phospho-CTD Ser2
GSM4987778
THP-1 DMSO RNAPII CTD4H8
GSM4987779
THP-1 CDK9i RNAPII CTD4H8
GSM4987780
THP-1 DBK-1154 RNAPII CTD4H8
GSM4987781
THP-1 CDK9i + DBK-1154 RNAPII CTD4H8
GSM4987782
S2 sgSCR input DNA
GSM4987783
S2 sgSCR DMSO RNAPII CTD4H8
GSM4987784
S2 sgSCR CDK9i RNAPII CTD4H8
GSM4987785
S2 sgINTS6D DMSO RNAPII CTD4H8
GSM4987786
S2 Cas9 sgINTS6D CDK9i RNAPII CTD4H8
GSM4987787
S2 Cas9 sgINTS6E DMSO RNAPII CTD4H8
GSM4987788
S2 Cas9 sgINTS6E CDK9i RNAPII CTD4H8
GSM4987789
THP1 Input Pooled
GSM4987790
THP1 Acute Control
GSM4987791
THP1 Acute INTS6 Knockout
This SuperSeries is composed of the following SubSeries:
GSE163802
A PP2A-Integrator complex fine-tunes transcription by opposing CDK9 [3UTR-seq]
GSE163803
A PP2A-Integrator complex fine-tunes transcription by opposing CDK9 [4sU-seq]
GSE163804
A PP2A-Integrator complex fine-tunes transcription by opposing CDK9 [ChIP-seq]
Relations
BioProject
PRJNA687654
Download family
Format
SOFT formatted family file(s)
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TXT
Supplementary file
Size
Download
File type/resource
GSE163805_RAW.tar
6.1 Gb
(http)
(custom)
TAR (of BW, TDF)
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