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| Status |
Public on Oct 28, 2021 |
| Title |
Transcript analysis under phosphate and iron deprivation in 7 day old Arabidopsis thaliana seedlings |
| Organism |
Arabidopsis thaliana |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
Arabidopsis wild-type plants (Col-0 accession) were grown on control (+Fe+P) for 7 days on 0.1X MS then transferred to three different medium: control (+Fe+P), iron deficiency (-Fe+P), and iron and phosphate deficiency conditions (-Fe-P). Shoots were collected 39 h, 52 h and 76 h after the transfer. For RNA-seq experiments, three biological replicates were used for each time point (39h, 52h and 76h) and each condition (+Fe+P, -Fe+P and -Fe-P) for a total of 27 samples.
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| Overall design |
Transcrip analysis of 7do Arabidospsis thaliana seedlings under three conditions (+P+Fe, +P-Fe, -P-Fe) at three time points: 39h, 52h and 76h
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| Contributor(s) |
Dorone Y |
| Citation(s) |
34893639 |
| |
| Submission date |
Dec 14, 2020 |
| Last update date |
Apr 20, 2022 |
| Contact name |
Yanniv Dorone |
| Organization name |
Stanford University
|
| Street address |
371 Jane Stanford Way
|
| City |
Stanford |
| ZIP/Postal code |
94305 |
| Country |
USA |
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| Platforms (1) |
| GPL19580 |
Illumina NextSeq 500 (Arabidopsis thaliana) |
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| Samples (27)
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| Relations |
| BioProject |
PRJNA685167 |
| SRA |
SRP297920 |
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