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Series GSE160562 Query DataSets for GSE160562
Status Public on Jun 28, 2021
Title Host response to RhCMV/SIV immunization through subcutaneous and oral route
Organism Macaca mulatta
Experiment type Expression profiling by high throughput sequencing
Summary Strain 68-1–derived Rhesus Cytomegalovirus (RhCMV) vectors expressing simian immunodeficiency virus (SIV) proteins (RhCMV/SIV) are able to elicit and maintain cellular immune responses that stringently control and subsequently clear a mucosal challenge with highly pathogenic SIV in 50-60% of vaccinated rhesus monkeys (RMs). Here, we utilize whole blood transcriptomic profiling to identify host responses correlated to RhCMV/SIV efficacy.
 
Overall design Longitudinal mRNA profiling of whole blood from rhesus macaques during immunization with RhCMV/SIV.
 
Citation(s) 34228762, 36536032
Submission date Oct 30, 2020
Last update date Jan 11, 2023
Contact name Michael Gale, Jr
E-mail(s) [email protected]
Organization name University of Washington
Department Immunology
Street address 750 Republican St. E360, Box 358059
City Seattle
State/province Washington
ZIP/Postal code 98109
Country USA
 
Platforms (1)
GPL21120 Illumina NextSeq 500 (Macaca mulatta)
Samples (403)
GSM4905629 O_W0D0_O1_Unprotected
GSM4905630 O_W0D1_O1_Unprotected
GSM4905631 O_W0D3_O1_Unprotected
Relations
BioProject PRJNA677978
SRA SRP292387

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE160562_O01_CountMatrix.csv.gz 10.1 Mb (ftp)(http) CSV
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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