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Series GSE160402 Query DataSets for GSE160402
Status Public on Jun 16, 2021
Title Microglia RAGE exacerbates the progression of neurodegeneration within the SOD1G93A murine model of amyotrophic lateral sclerosis in a sex-dependent manner
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Burgeoning evidence highlights seminal roles for microglia in the pathogenesis of neurodegenerative diseases including amyotrophic lateral sclerosis (ALS). The receptor for advanced glycation end products (RAGE) binds ligands relevant to ALS that accumulate in the diseased spinal cord and RAGE has been previously implicated in the progression of ALS pathology. We generated a novel mouse model to temporally delete Ager from microglia in the murine SOD1G93A model of ALS. Microglia Ager deficient SOD1G93A mice and controls were examined for changes in survival, motor function, gliosis, motor neuron numbers, and transcriptomic analyses of lumbar spinal cord. Furthermore, we examined bulk-RNA-sequencing transcriptomic analyses of human ALS cervical spinal cord. Transcriptomic analysis of human cervical spinal cord reveals a range of AGER expression in ALS patients, which was negatively correlated with age at disease onset and death or tracheostomy. The degree of AGER expression related to differential expression of pathways involved in extracellular matrix, lipid metabolism, and intercellular communication. Microglia display increased RAGE immunoreactivity in the spinal cords of high AGER expressing patients and in the SOD1G93A murine model of ALS vs. respective controls. We demonstrate that microglia Ager deletion at the age of symptomatic onset, day 90, in SOD1G93A mice extends survival in male but not female mice. Critically, many of the pathways identified in human ALS patients that accompanied increased AGER expression were significantly ameliorated by microglia Ager deletion in male SOD1G93A mice. Our results indicate that microglia RAGE disrupts communications with cell types including astrocytes and neurons, intercellular communication pathways that divert microglia from a homeostatic to an inflammatory and tissue-injurious program. In totality, microglia RAGE contributes to the progression of SOD1G93A murine pathology in male mice and may be relevant in human disease.
 
Overall design RNA profiles from lumbar spinal cord tissue of microglia Ager knockout mice, and Cre controls from an amyotrophic lateral sclerosis mouse model were compared.
 
Contributor(s) MacLean M, Juranek J, Cuddapah S, López-Díez R, Ruiz HH, Hu J, Frye L, Li H, Gugger PF, Schmidt A
Citation(s) 34130712
NIH grant(s)
Grant ID Grant title Affiliation Name
F31 NS120424 RAGE: A Potential Contributor to Neuroinflammation in Amyotrophic Lateral Sclerosis NEW YORK UNIVERSITY SCHOOL OF MEDICINE Michael MacLean
Submission date Oct 29, 2020
Last update date Jun 21, 2021
Contact name Paul Francis Gugger
E-mail(s) [email protected]
Organization name NYU Langone Health
Department Medicine
Street address 435 E 30th St
City New York
State/province NY
ZIP/Postal code 10016
Country USA
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (8)
GSM4872994 E1776 - ALS microglia Ager deleted
GSM4872995 E5231 - ALS microglia Ager deleted
GSM4872996 E5248 - ALS microglia Ager deleted
Relations
BioProject PRJNA673172
SRA SRP289779

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Supplementary file Size Download File type/resource
GSE160402_counts.normalized.txt.gz 1.1 Mb (ftp)(http) TXT
GSE160402_counts.raw.txt.gz 532.3 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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