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| Status |
Public on Sep 29, 2020 |
| Title |
Integrated mRNA/miRNA-seq of Caco-2 and HT-29 cells under chemical hypoxia (cobalt chloride, oxyquinoline) |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
Non-coding RNA profiling by high throughput sequencing
|
| Summary |
To uncover hypoxia-induced miRNA-mRNA interactions landscape in colorectal cancer cell lines we performed integrated miRNA/mRNA sequencing of Caco-2 and HT-29 cells. Hypoxia was chemically induced via 24 h cobalt(II) chloride and oxyquinoline treatments.
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| |
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| Overall design |
The experiment included CoCl2-treated, oxyquinoline-treated and control Caco-2, HT-29 cells, three biological replicated per group were used.
|
| Web link |
https://www.frontiersin.org/articles/10.3389/fgene.2021.662468
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| |
|
| Contributor(s) |
Nersisyan S |
| Citation(s) |
34858489 |
| |
| Submission date |
Sep 28, 2020 |
| Last update date |
Dec 14, 2021 |
| Contact name |
Stepan Nersisyan |
| E-mail(s) |
[email protected]
|
| Organization name |
HSE University
|
| Department |
Faculty of Biology and Biotechnology
|
| Street address |
Vavilova str 7
|
| City |
Moscow |
| ZIP/Postal code |
117312 |
| Country |
Russia |
| |
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| Platforms (1) |
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| Samples (36)
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| Relations |
| BioProject |
PRJNA666072 |
| SRA |
SRP285580 |
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