|
| Status |
Public on Aug 11, 2020 |
| Title |
Effects of Gongronella sp. w5 on Medicago truncatula transcriptome |
| Organism |
Medicago truncatula |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
To investigate the gene expression levels of Medicago truncatula roots after beneficial fungi Gongronella sp. w5 inoculated.Gongronella sp. w5 promoted M. truncatula growth and caused the accumulation of sucrose in M. truncatula root tissue at 16 day-post-inoculation (dpi) without invading into the root cells. The transport of photosynthetic product sucrose to the rhizosphere by M. truncatula root cells was accelerated by upregulating the SWEET gene.
|
| |
|
| Overall design |
Three biological replicates of M. truncatula root with or without w5 inoculation were used for the transcriptome analysis.
|
| |
|
| Contributor(s) |
Zemin F, Xiaojie W |
| Citation(s) |
33584561 |
| |
| Submission date |
Aug 10, 2020 |
| Last update date |
Feb 16, 2021 |
| Contact name |
Wang Xiaojie |
| E-mail(s) |
[email protected]
|
| Phone |
18756074074
|
| Organization name |
Anhui University
|
| Street address |
No. 111 Road, Kowloon
|
| City |
Hefei |
| ZIP/Postal code |
230601 |
| Country |
China |
| |
|
| Platforms (1) |
| GPL17491 |
Illumina HiSeq 2000 (Medicago truncatula) |
|
| Samples (6)
|
| GSM4716847 |
DZG_1: M. truncatula root without Gongronella sp. w5 inoculation_rep1 |
| GSM4716848 |
DZG_2: M. truncatula root without Gongronella sp. w5 inoculation_rep2 |
| GSM4716849 |
DZG_3: M. truncatula root without Gongronella sp. w5 inoculation_rep3 |
| GSM4716850 |
CLG_1: M. truncatula root with Gongronella sp. w5 inoculation_rep1 |
| GSM4716851 |
CLG_2: M. truncatula root with Gongronella sp. w5 inoculation_rep2 |
| GSM4716852 |
CLG_3: M. truncatula root with Gongronella sp. w5 inoculation_rep3 |
|
| Relations |
| BioProject |
PRJNA656200 |
| SRA |
SRP276838 |
Less...
More...