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Series GSE154720 Query DataSets for GSE154720
Status Public on Jul 21, 2020
Title meRIP-seq and RNA-seq on proliferating and differentiating cultured C2C12 cells
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Other
Summary To determine differences in the m6A-modified transcriptional profile of cultured proliferating and differentiating myoblasts.
 
Overall design The m6A profile of C2C12 myoblasts during proliferation (n=2) and that had been in differentiation media for 3 days (n=2) were compared.
 
Contributor(s) Thalacker-Mercer AE, Gheller BJ, Blum JE, Fong EH, Malysheva OV, Cosgrove BD
Citation(s) 33083017
Submission date Jul 20, 2020
Last update date Oct 22, 2020
Contact name Anna E Thalacker-Merc er
Organization name University of Alabama at Birmingham
Street address 1720 University Blvd
City Birmingham
State/province Alabama
ZIP/Postal code 35294
Country USA
 
Platforms (1)
GPL21103 Illumina HiSeq 4000 (Mus musculus)
Samples (8)
GSM4677822 GM-RNA-Input
GSM4677823 GM-Input-2
GSM4677824 DM-RNA-Input
Relations
BioProject PRJNA647312
SRA SRP272583

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE154720_All_sample_peaks_mRNA.xlsx 8.6 Mb (ftp)(http) XLSX
GSE154720_DM-IP_2-peaks.txt.gz 857.7 Kb (ftp)(http) TXT
GSE154720_DM-RNA-IP-peaks.txt.gz 1.1 Mb (ftp)(http) TXT
GSE154720_GM-IP_2.txt.gz 970.9 Kb (ftp)(http) TXT
GSE154720_GM-RNA-IP.txt.gz 1.1 Mb (ftp)(http) TXT
GSE154720_normalizedCounts_TMM.txt.gz 388.8 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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