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Series GSE152265 Query DataSets for GSE152265
Status Public on Jun 12, 2020
Title Sustained activation of AMPK enhances differentiation of human iPSC-derived cardiomyocytes via sirtuin activation
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Lee and colleagues demonstrate that sustained activation of AMPK enhances differentiation of iPSC-derived cardiomyocytes. Sustained AMPK activation decreased histone acetylation at known target sites for nuclear-localized sirtuins, suggesting that AMPK activation enhances sirtuin activity. AMPK-induced sirtuin-mediated deacetylation of histone proteins may regulate chromatin accessibility and enhance cardiomyocyte differentiation.
 
Overall design We have done the experiment in duplicate for NAM and AICAR treated iPSC-derived Cardiomyoytes.
 
Contributor(s) Sarikhani M, Lee RT
Citation(s) 32649901
Submission date Jun 11, 2020
Last update date Aug 24, 2020
Contact name Mohsen Sarikhani
E-mail(s) [email protected]
Phone 8578560063
Organization name Harvard University
Department Stem cell and regenerative biology
Lab Lee
Street address 7 Divinity,Fairchild 159
City Cambridge
State/province MA
ZIP/Postal code 02138
Country USA
 
Platforms (1)
GPL21697 NextSeq 550 (Homo sapiens)
Samples (4)
GSM4610438 NAM_rep1
GSM4610439 NAM_rep2
GSM4610440 AICAR_rep1
Relations
BioProject PRJNA638838
SRA SRP266919

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE152265_RAW.tar 1.4 Gb (http)(custom) TAR (of BW)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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