|
| Status |
Public on Oct 07, 2020 |
| Title |
The ERβ cistrome in colon cancer |
| Organism |
Homo sapiens |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
In order to elucidate the mechanism of ERβ in the colon, we validated ERβ antibodies, opti-mized chromatin-immunoprecipitation (ChIP), and performed ChIP-Seq of CRC engineered cell lines re-expressing ERβ.We present for the first time, the cistrome of nuclear receptor ERβ in different CRC cell lines.
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| Overall design |
Each ChIP was performed three times. For further analysis, we focused on sites present in at least two out of three replicates
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| |
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| Contributor(s) |
Indukuri R, Williams C |
| Citation(s) |
33754337, 38031019 |
| |
| Submission date |
May 06, 2020 |
| Last update date |
Dec 13, 2023 |
| Contact name |
Rajitha Indukuri |
| E-mail(s) |
[email protected]
|
| Phone |
0760285999
|
| Organization name |
Scilifelab
|
| Street address |
Tomtebodavägen 23a, Solna
|
| City |
Stockholm |
| State/province |
Sweden |
| ZIP/Postal code |
17165 |
| Country |
Sweden |
| |
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| Platforms (1) |
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| Samples (11)
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| Relations |
| BioProject |
PRJNA630726 |
| SRA |
SRP260284 |
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