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Series GSE147987 Query DataSets for GSE147987
Status Public on Apr 02, 2020
Title A combinatorial code of transcription factors specifies subtypes of visual motion-sensing neurons in Drosophila
Organism Drosophila melanogaster
Experiment type Expression profiling by high throughput sequencing
Summary Direction-selective T4/T5 neurons exist in four subtypes, each tuned to visual motion along one of the four cardinal directions. Along with their directional tuning, neurons of each T4/T5 subtype orient their dendrites and project their axons in a subtype-specific manner. Directional tuning, thus, appears strictly linked to morphology in T4/T5 neurons. How the four T4/T5 subtypes acquire their distinct morphologies development remains largely unknown. Here, we investigated when and how the dendrites of the four T4/T5 subtypes acquire their specific orientations, and profiled the transcriptomes of all T4/T5 neurons during this process. This revealed a simple and stable combinatorial code of transcription factors defining the four T4/T5 subtypes during their development. Changing the combination of transcription factors of specific T4/T5 subtypes resulted in predictable and complete conversions of subtype-specific properties, i.e. dendrite orientation and matching axon projection pattern. Therefore, a combinatorial code of transcription during factors coordinates the development of dendrite and axon morphologies to generate anatomical specializations differentiating subtypes of T4/T5 motion-sensing neurons.
 
Overall design Single-cell transcriptomic analysis of T4/T5 subtypes during different developmental stages
Web link https://dev.biologists.org/content/early/2020/04/01/dev.186296
 
Citation(s) 32238425
Submission date Apr 02, 2020
Last update date Apr 05, 2020
Contact name Nikolai Li-Heng Hoermann
E-mail(s) [email protected]
Organization name Max Planck Institute of Neurobiology
Department Circuits-Computation-Models
Street address Am Klopferspitz 18
City Martinsried
State/province Bavaria
ZIP/Postal code 82152
Country Germany
 
Platforms (1)
GPL19132 Illumina NextSeq 500 (Drosophila melanogaster)
Samples (10)
GSM4451487 24h_APF_1
GSM4451488 24h_APF_2
GSM4451489 36h_APF_1
Relations
BioProject PRJNA622762
SRA SRP255018

Download family Format
SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE147987_RAW.tar 394.1 Mb (http)(custom) TAR (of MTX, TSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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