NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE147233 Query DataSets for GSE147233
Status Public on Sep 30, 2020
Title Df(h15q13)/+ mouse model reveals loss of astrocytes and synaptic-related changes of the excitatory and inhibitory circuits in the medial prefrontal cortex.
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary RNA sequencing is applied to medial preforntal cortex (mPFC) in Df(h15q13)/+ mouse model of the 15q13.3 hemizygous deletion. The overall goal is to identify the transcriptomic signature of the 15q13.3 deletion.
 
Overall design RNA sequencing was performed in mPFC of 8-10 weeks male Df(h15q13)/+ mice (n=7) and wild type littermates (n=8) using BGISEQ-500 platform.
 
Contributor(s) Al-Absi A
Citation(s) 33123721
Submission date Mar 19, 2020
Last update date Dec 30, 2020
Contact name Abdel-Rahman Al-Absi
E-mail(s) [email protected]
Organization name Aarhus University
Street address Palle Juul Jensens Boulevard 99
City Aarhus
ZIP/Postal code 8200
Country Denmark
 
Platforms (1)
GPL23479 BGISEQ-500 (Mus musculus)
Samples (15)
GSM4421288 WT1
GSM4421289 WT2
GSM4421290 WT3
Relations
BioProject PRJNA613469
SRA SRP253354

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE147233_15q13_TPM_values.xlsx 6.4 Mb (ftp)(http) XLSX
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap