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| Status |
Public on Dec 27, 2009 |
| Title |
Gene expression in aerial parts of rice-Arabidopsis Os-LBD37 FOX plants |
| Organism |
Arabidopsis thaliana |
| Experiment type |
Expression profiling by array
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| Summary |
Aerial parts of the rice-Arabidopsis FOX (Full-length cDNA overexpressor) lines K16331 and K19624 harboring the rice FL cDNA of LBD37 (Os-LBD37) were analyzed. LBD37 belongs to the plant- specific LOB- (Lateral Organ Boundary) domain family proteins first characterized in Arabidopsis. Results point towards an involvement of the rice LBD37 ortholog of Arabidopsis in nitrogen metabolism- related processes.
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| Overall design |
K16331 (T2) and empty vector control plants (T2) were grown for 18 days on solid MS- medium supplemented with 20mg/l Hygromycin. For each hybridization on Affymetrix microarrays, 2 independent plants for K16331 were used.
Homozygote K19624 (T3) and empty vector control plants (T3) were grown for 18 days on solid MS- medium. For each hybridization on Affymetrix microarrays, 1 plant was used.
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| Contributor(s) |
Albinsky D, Kusano M, Fukushima A, Hayashi N |
| Citation(s) |
20085895 |
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| Submission date |
Jan 29, 2009 |
| Last update date |
Aug 15, 2018 |
| Contact name |
Miyako Kusano |
| E-mail(s) |
[email protected]
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| Organization name |
RIKEN CSRS
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| Street address |
1-7-22, Suehiro, Tsurumi
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| City |
Yokohama |
| State/province |
Kanagawa |
| ZIP/Postal code |
230-0045 |
| Country |
Japan |
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| Platforms (1) |
| GPL198 |
[ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array |
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| Samples (12)
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| GSM361163 |
rice-Arabidopsis FOX line K16331, replicate 1 |
| GSM363537 |
rice-Arabidopsis FOX line K16331, replicate 2 |
| GSM363538 |
rice-Arabidopsis FOX line K16331, replicate 3 |
| GSM363539 |
empty vector control for rice-Arabidopsis FOX lines, replicate 1 |
| GSM363540 |
empty vector control for rice-Arabidopsis FOX lines, replicate 2 |
| GSM363541 |
empty vector control for rice-Arabidopsis FOX lines, replicate 3 |
| GSM363542 |
rice-Arabidopsis FOX line K19624, replicate 1 |
| GSM363543 |
rice-Arabidopsis FOX line K19624, replicate 2 |
| GSM363544 |
rice-Arabidopsis FOX line K19624, replicate 3 |
| GSM363545 |
empty vector control (T3) for rice-Arabidopsis FOX lines, replicate 1 |
| GSM363546 |
empty vector control (T3) for rice-Arabidopsis FOX lines, replicate 2 |
| GSM363547 |
empty vector control (T3) for rice-Arabidopsis FOX lines, replicate 3 |
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| This SubSeries is part of SuperSeries: |
| GSE14663 |
Involvement of the rice LBD37 (OsLBD37) ortholog of Arabidopsis in nitrogen metabolism- and senescence-related processes |
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| Relations |
| Affiliated with |
GSE69995 |
| BioProject |
PRJNA114433 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE14646_RAW.tar |
27.7 Mb |
(http)(custom) |
TAR (of CEL, CHP) |
| Processed data included within Sample table |
| Processed data provided as supplementary file |
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