|
| Status |
Public on Dec 01, 2021 |
| Title |
Phased gene expression and chromatin accessibility during progressive EMT and MET linked to dynamic CTCF engagement (ATAC-Seq) |
| Organism |
Homo sapiens |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
We report the chromatin accessibility alterations and gene expression changes in TGFB-induced and -withdrawn reversible EMT in MCF10A mammary epithelial cells
|
| |
|
| Overall design |
MCF10A cells were treated and withdrawn from TGFB for various durations and subjected to ATAC- and RNA-seq
|
| |
|
| Contributor(s) |
Johnson KS, Taube JH |
| Citation(s) |
35008373 |
| |
| Submission date |
Feb 24, 2020 |
| Last update date |
Jan 20, 2022 |
| Contact name |
Joe Taube |
| E-mail(s) |
[email protected]
|
| Phone |
2547102097
|
| Organization name |
Baylor University
|
| Street address |
One Bear Place #97388
|
| City |
Waco |
| State/province |
Texas |
| ZIP/Postal code |
76798-7388 |
| Country |
USA |
| |
|
| Platforms (1) |
|
| Samples (19)
|
|
| This SubSeries is part of SuperSeries: |
| GSE145851 |
Phased gene expression and chromatin accessibility during progressive EMT and MET linked to dynamic CTCF engagement |
|
| Relations |
| BioProject |
PRJNA608512 |
| SRA |
SRP250579 |
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