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| Status |
Public on Feb 04, 2020 |
| Title |
Transgenerational effects of water-deficit and heat stress on germination and seedling vigour – new insights from durum wheat microRNAs |
| Organism |
Triticum turgidum subsp. durum |
| Experiment type |
Non-coding RNA profiling by high throughput sequencing
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| Summary |
Water deficiency and heat stress can severely limit crop production and quality. Stress imposed on the parents during reproduction could have transgenerational effects on their progeny. Seeds with different origins can vary significantly in germination time-course and early growth. Here, we investigated how water-deficit and heat stress on parental durum wheat plants affected seedling establishment of the subsequent generation. One stress-tolerant and one stress-sensitive Australian durum genotype were used. Seeds were collected from parents with or without exposure to stress during reproduction. Generally stress on the previous generation negatively affected seed germination and seedling vigour, but to a lesser extent in the tolerant variety. Small RNA sequencing utilising the new durum genome assembly has revealed significant differences in microRNA (miRNA) expression in the two genotypes. A bioinformatics approach was used to identify multiple miRNA targets which have critical molecular functions in stress adaptation and plant development and could therefore contribute to the phenotypic differences observed. Our data provides the first confirmation of the transgenerational effects of reproductive-stage stress on germination and seedling establishment in durum wheat. New insights gained on the epigenetic level indicate that durum miRNAs could be key factors in optimising seed vigour for superior breeding germplasm and/or varieties.
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| Overall design |
Examine the seedling miRNA population from two seed source of two genotypes
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| Contributor(s) |
Liu H, Able AJ, Able JA |
| Citation(s) |
32033017 |
| |
| Submission date |
Jan 10, 2020 |
| Last update date |
Feb 18, 2020 |
| Contact name |
Haipei Liu |
| E-mail(s) |
[email protected]
|
| Organization name |
The University of Adelaide
|
| Street address |
PMB1 Waite Building, School AFW
|
| City |
Urrbrae |
| State/province |
South Australia |
| ZIP/Postal code |
5064 |
| Country |
Australia |
| |
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| Platforms (1) |
| GPL20257 |
Illumina HiSeq 2500 (Triticum turgidum subsp. durum) |
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| Samples (4)
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| Relations |
| BioProject |
PRJNA600522 |
| SRA |
SRP241230 |
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