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Series GSE142821 Query DataSets for GSE142821
Status Public on Dec 27, 2020
Title Divergent role for STAT5 in the adaptive responses of natural killer cells
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Natural killer (NK) cells are innate lymphocytes with the capacity to elicit adaptive features, including clonal expansion and immunological memory. Because signal transducer and activator of transcription 5 (STAT5) is essential for NK cell development, the role of this transcription factor and its upstream cytokines IL-2 and IL-15 during infection have not been carefully investigated. In this study, we investigate how STAT5 regulates transcription during viral infection. We demonstrate that STAT5 is induced in NK cells by IL-12 and STAT4 early after infection, and that partial STAT5 deficiency results in a defective capacity of NK cells to generate long-lived memory cells. Furthermore, we find a functional dichotomy of IL-2 and IL-15 signaling outputs during viral infection, whereby both cytokines drive clonal expansion, but only IL-15 is required for memory NK cell survival. We thus highlight a novel role for STAT5 signaling in promoting an optimal antiviral NK cell response.
 
Overall design RNA-seq was performed on Ly49H+ NK cells harvested during in vivo MCMV infection.
 
Contributor(s) Lau CM, Sun JC
Citation(s) 33326784
Submission date Jan 02, 2020
Last update date Dec 27, 2020
Contact name Colleen Lau
Organization name Cornell University
Department Microbiology & Immunology
Street address 930 Campus Road
City Ithaca
State/province New York
ZIP/Postal code 14850
Country USA
 
Platforms (1)
GPL21103 Illumina HiSeq 4000 (Mus musculus)
Samples (12)
GSM4240617 STAT5_CKO_D2_1
GSM4240618 STAT5_CKO_D2_2
GSM4240619 STAT5_CKO_D2_3
Relations
BioProject PRJNA598546
SRA SRP239264

Download family Format
SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE142821_RNAseq_STAT5CKO_MCMV_rawCounts.txt.gz 829.8 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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