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Series GSE140384 Query DataSets for GSE140384
Status Public on Jun 01, 2021
Title Three life stages
Organisms Trichinella spiralis; Trichinella nativa; Trichinella nelsoni; Trichinella pseudospiralis; Trichinella britovi; Trichinella sp. T6; Trichinella sp. T8; Trichinella murrelli; Trichinella sp. T9; Trichinella papuae; Trichinella zimbabwensis; Trichinella patagoniensis
Experiment type Expression profiling by high throughput sequencing
Methylation profiling by high throughput sequencing
Other
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 34179010
Submission date Nov 14, 2019
Last update date Jul 02, 2021
Contact name Yayan Feng
E-mail(s) [email protected]
Phone 13161164012
Organization name Chinese Academy of Agricultural Sciences
Lab Genome Analysis Laboratory of the Ministry of Agriculture
Street address No. 7 pengfei road, dapeng new district, shenzhen
City Shenzhen,Guangdong Province,China
State/province --- Select a state ---
ZIP/Postal code 518000
Country China
 
Platforms (24)
GPL15773 Illumina HiSeq 2000 (Trichinella spiralis)
GPL24055 Illumina HiSeq 2500 (Trichinella spiralis)
GPL24891 Illumina HiSeq 2500 (Trichinella pseudospiralis)
Samples (84)
GSM4142185 T1.WGBS.AD
GSM4142186 T1.WGBS.ML
GSM4142187 T1.WGBS.NBL
This SuperSeries is composed of the following SubSeries:
GSE139486 12 single-base resolution methylomes of three life stages using WGBS
GSE140382 12 transcriptomes of three life stages using RNA-Seq
GSE169404 WGS data to conduct phylogenetic analysis in Trichinella
Relations
BioProject PRJNA589548

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE140384_RAW.tar 5.1 Gb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
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