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Series GSE138938 Query DataSets for GSE138938
Status Public on Jun 01, 2020
Title β-catenin regulates FOXP2 transcriptional activity via multiple binding sites
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary We observed different gene expression by overexpressing the transcription factor FOXP2 in U2OS cells compared to mock-transfected cells. Additionally, we found β-catenin as co-activator binding directly to FOXP2. Activation of Wnt signaling was changing the transcriptional activity of FOXP2. Other functional and regulatory elements were found within FOXP2 and were confirmed by RNA-Seq.
 
Overall design Determining gene expression differences by overexpressing an transcription factor (wildtype and mutant) in human osteosarcoma cells and additional activation of an Signaling pathway linked to the function of this transcription factor
 
Contributor(s) Richter G, Madl T
Citation(s) 33284517
Submission date Oct 16, 2019
Last update date Jul 08, 2021
Contact name Gesa Richter
E-mail(s) [email protected]
Organization name Medical University Graz
Street address Neue Stiftingtalstrasse 6
City Graz
ZIP/Postal code 8010
Country Austria
 
Platforms (1)
GPL21697 NextSeq 550 (Homo sapiens)
Samples (30)
GSM4123907 Control rep1
GSM4123908 Control rep2
GSM4123909 Control rep3
Relations
BioProject PRJNA577855
SRA SRP225889

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SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE138938_annotated_combined.counts.txt.gz 1.7 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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