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| Status |
Public on Apr 29, 2009 |
| Title |
Barley root gene expression during colonisation by Piriformospora indica |
| Organism |
Hordeum vulgare |
| Experiment type |
Expression profiling by array
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| Summary |
The fungal mutualist Piriformospora indica is colonising barley roots thereby mediating various beneficial effects to its host. The interaction is characterised by an initial biotrophic interaction stage which is followed by a cell death-dependent colonisation phase. We used microarrays to identify the global programme of gene expression during the colonisation process of barley roots by P. indica and to obtain informations into plant defense and metabolic reprogramming.
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| Overall design |
In three independent experiments plants were inoculated with Piriformospora indica. Samples from inoculated roots were taken at 1, 3, and 7 days after inoculation. Samples from uninfected control plants were taken at the same time points.
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| Citation(s) |
19392709 |
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| Submission date |
Nov 27, 2008 |
| Last update date |
Mar 20, 2012 |
| Contact name |
Patrick Schaefer |
| E-mail(s) |
[email protected]
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| Organization name |
Institute of Phytopathology and Applied Zoology
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| Street address |
Heinrich-Buff-Ring 26-32
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| City |
Giessen |
| ZIP/Postal code |
35392 |
| Country |
Germany |
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| Platforms (1) |
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| Samples (18)
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| GSM346495 |
Barley root gene expression 1d Treatment: Mock, Replication I |
| GSM346496 |
Barley root gene expression 1d Treatment: Mock, Replication II |
| GSM346497 |
Barley root gene expression 1d Treatment: Mock, Replication III |
| GSM346498 |
Barley root gene expression 1d Treatment: P.indica, Replication I |
| GSM346499 |
Barley root gene expression 1d Treatment: P.indica, Replication II |
| GSM346500 |
Barley root gene expression 1d Treatment: P.indica, Replication III |
| GSM346501 |
Barley root gene expression 3d Treatment: Mock, Replication I |
| GSM346502 |
Barley root gene expression 3d Treatment: Mock, Replication II |
| GSM346503 |
Barley root gene expression 3d Treatment: Mock, Replication III |
| GSM346504 |
Barley root gene expression 3d Treatment: P.indica, Replication I |
| GSM346505 |
Barley root gene expression 3d Treatment: P.indica, Replication II |
| GSM346506 |
Barley root gene expression 3d Treatment: P.indica, Replication III |
| GSM346507 |
Barley root gene expression 7d Treatment: Mock, Replication I |
| GSM346508 |
Barley root gene expression 7d Treatment: Mock, Replication II |
| GSM346509 |
Barley root gene expression 7d Treatment: Mock, Replication III |
| GSM346510 |
Barley root gene expression 7d Treatment: P.indica, Replication I |
| GSM346511 |
Barley root gene expression 7d Treatment: P.indica, Replication II |
| GSM346512 |
Barley root gene expression 7d Treatment: P.indica, Replication III |
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| Relations |
| BioProject |
PRJNA109417 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE13756_RAW.tar |
75.1 Mb |
(http)(custom) |
TAR (of TXT) |
| Processed data included within Sample table |
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