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GEO accession:
Series GSE137209
Query DataSets for GSE137209
Status
Public on Sep 09, 2020
Title
Bromodomain and HDAC inhibitors equivalently suppress PI3K/AKT inhibition resistance in cancers
Organism
Homo sapiens
Experiment type
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation missing
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Submission date
Sep 10, 2019
Last update date
Sep 13, 2020
Contact name
Zhenqing Ye
E-mail(s)
[email protected]
Organization name
UT Health San Antonio
Department
6Department of Population Health Sciences
Street address
8403 Floyd Curl Dr
City
San Antonio
State/province
TX
ZIP/Postal code
78229
Country
USA
Platforms (2)
GPL20301
Illumina HiSeq 4000 (Homo sapiens)
GPL21290
Illumina HiSeq 3000 (Homo sapiens)
Samples (56)
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More...
GSM4072891
PC-3_control_Rep1
GSM4072892
PC-3_control_Rep2
GSM4072893
PC-3_control_Rep3
GSM4072894
PC-3_GDC-R_Rep1
GSM4072895
PC-3_GDC-R_Rep2
GSM4072896
PC-3_GDC-R_Rep3
GSM4072996
control_vehicle_H3K27ac_rep1
GSM4072997
control_vehicle_H3K27ac_rep2
GSM4072998
GDC-R_vehicle_H3K27ac_rep1
GSM4072999
GDC-R_vehicle_H3K27ac_rep2
GSM4073000
GDC-R_iCBP_H3K27ac_rep1
GSM4073001
GDC-R_iCBP_H3K27ac_rep2
GSM4073002
GDC-R_SAHA_H3K27ac_rep1
GSM4073003
GDC-R_SAHA_H3K27ac_rep2
GSM4073004
control_vehicle_BRD4_rep1
GSM4073005
control_vehicle_BRD4_rep2
GSM4073006
GDC-R_vehicle_BRD4_rep1
GSM4073007
GDC-R_vehicle_BRD4_rep2
GSM4073008
GDC-R_iCBP_BRD4_rep1
GSM4073009
GDC-R_iCBP_BRD4_rep2
GSM4073010
GDC-R_SAHA_BRD4_rep1
GSM4073011
GDC-R_SAHA_BRD4_rep2
GSM4073012
control_Input
GSM4073013
GDC-R_Input
GSM4431246
PC3 control+vehicle H3K27-ac (S2 cell Spike-in) rep1
GSM4431247
PC3 control+vehicle H3K27-ac (S2 cell Spike-in) rep2
GSM4431248
PC3 GDC-resist+vehicle H3K27-ac (S2 cell Spike-in) rep1
GSM4431249
PC3 GDC-resist+vehicle H3K27-ac (S2 cell Spike-in) rep2
GSM4431250
PC3 GDC-resist + iCBP112 H3K27-ac (S2 cell Spike-in) rep1
GSM4431251
PC3 GDC-resist + iCBP112 H3K27-ac (S2 cell Spike-in) rep2
GSM4431252
PC3 GDC-resist + SAHA H3K27-ac (S2 cell Spike-in) rep1
GSM4431253
PC3 GDC-resist + SAHA H3K27-ac (S2 cell Spike-in) rep2
GSM4431254
PC3 control H3K9/K14-ac rep1
GSM4431255
PC3 control H3K9/K14-ac rep2
GSM4431256
PC3 GDC-resist H3K9/K14-ac rep1
GSM4431257
PC3 GDC-resist H3K9/K14-ac rep2
GSM4431258
PC3 control H4-ac rep1
GSM4431259
PC3 control H4-ac rep2
GSM4431260
PC3 GDC-resist H4-ac rep1
GSM4431261
PC3 GDC-resist H4-ac rep2
GSM4431262
PC3 control CBP rep1
GSM4431263
PC3 control CBP rep2
GSM4431264
PC3 GDC-resist CBP rep1
GSM4431265
PC3 GDC-resist CBP rep2
GSM4431266
PC3 control p300 rep1
GSM4431267
PC3 control p300 rep2
GSM4431268
PC3 GDC-resist p300 rep1
GSM4431269
PC3 GDC-resist p300 rep2
GSM4431270
PC3 control HDAC1 rep1
GSM4431271
PC3 control HDAC1 rep2
GSM4431272
PC3 GDC-resist HDAC1 rep1
GSM4431273
PC3 GDC-resist HDAC1 rep2
GSM4431274
PC3 control HDAC2 rep1
GSM4431275
PC3 control HDAC2 rep2
GSM4431276
PC3 GDC-resist HDAC2 rep1
GSM4431277
PC3 GDC-resist HDAC2 rep2
This SuperSeries is composed of the following SubSeries:
GSE137200
Pattern occupation of HDACs on chromatin determines PI3K/AKT inhibitor resistance in cancers [RNA-seq]
GSE137207
Pattern occupation of HDACs on chromatin determines PI3K/AKT inhibitor resistance in cancers [ChIP-seq]
GSE147455
An epigenetic vulnerability in PI3K/AKT inhibition resistant cancers is targetable by both bromodomain and HDAC inhibitors
Relations
BioProject
PRJNA564805
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Format
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Supplementary file
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File type/resource
GSE137209_RAW.tar
9.1 Gb
(http)
(custom)
TAR (of BW, XLS)
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