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| Status |
Public on Oct 30, 2019 |
| Title |
Genome binding/occupancy profiling of Tox2 in Tfh-like cells |
| Organism |
Mus musculus |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
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| Summary |
T Follicular helper (Tfh) cell is an effector CD4+ T cell subset specialized in helping B cells in germinal centers (GC) reactions. Although Bcl6 was identified as a Tfh-specific transcription factor essential for their development, the molecular mechanisms underlying Bcl6 regulation and Tfh cell commitment remain unclear. Here, we report that Tox2 transcription factor is highly expressed in Tfh cells, regulated by Bcl6 and STAT3. Forced expression of Tox2 drives Bcl6 expression and Tfh development. Mechanistically, Tox2 directly binds to Tfh-associated genes, including Bcl6, and functions to promote their chromatin accessibility and modulate the activities of other Tfh-regulating factors. Conversely, genetic deletion of Tox2 results in defective Tfh differentiation, and inhibiting both Tox and Tox2 in T cells abolishes Tfh differentiation and GC response. Thus, our results demonstrate that Tox2 is a key transcription factor that regulates Bcl6 expression and Tfh development and suggest a Tox2-Bcl6 axis in feed-forward regulation of Tfh program.
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| Overall design |
Because the commercial Tox2 antibody did not work well in western blot, we constructed a retrovirus expressing an HA tag at Tox2 C-terminus, with similar function as wild-type Tox2 in CD4+ T cells, for the ChIP experiment using T cells activated under Tfh-like condition.
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| Contributor(s) |
Xu W, Zhao X |
| Citation(s) |
31732165 |
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| Submission date |
Aug 28, 2019 |
| Last update date |
Dec 04, 2019 |
| Contact name |
Chen Dong |
| Organization name |
Tsinghua University
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| Department |
Institute for Immunology and School of Medicine
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| Lab |
Dongchen's lab
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| Street address |
Haidian District
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| City |
Beijing |
| ZIP/Postal code |
100084 |
| Country |
China |
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| Platforms (1) |
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| Samples (2) |
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| Relations |
| BioProject |
PRJNA562637 |
| SRA |
SRP219589 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE136539_RAW.tar |
349.2 Mb |
(http)(custom) |
TAR (of BW) |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data provided as supplementary file |
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