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Series GSE135161 Query DataSets for GSE135161
Status Public on Apr 07, 2020
Title Cryptic introns in lncRNAs recruit conserved Pir2/ARS2 protein to promote gene repression
Organism Schizosaccharomyces pombe
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Other
Expression profiling by high throughput sequencing
Non-coding RNA profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 32415063
Submission date Jul 31, 2019
Last update date Jun 08, 2020
Contact name Shiv Grewal
Phone 2407607553
Organization name NCI
Department LBMB
Lab Shiv Grewal
Street address NCI bldg 37 Rm 6068 9000 Rockville Pike
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
 
Platforms (2)
GPL16192 Illumina MiSeq (Schizosaccharomyces pombe)
GPL20584 Illumina NextSeq 500 (Schizosaccharomyces pombe)
Samples (11)
GSM3990101 ChIPseq of Pir2
GSM3990102 RIP using strain containing Pir2-GFP
GSM3990103 RIP using strain containing no tags
This SuperSeries is composed of the following SubSeries:
GSE135157 Cryptic introns in lncRNAs recruit conserved Pir2/ARS2 protein to promote gene repression [ChIP-seq]
GSE135158 Cryptic introns in lncRNAs recruit conserved Pir2/ARS2 protein to promote gene repression [RIP-seq]
GSE135159 Cryptic introns in lncRNAs recruit conserved Pir2/ARS2 protein to promote gene repression [RNA-Seq]
Relations
BioProject PRJNA557600

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE135161_RAW.tar 68.3 Mb (http)(custom) TAR (of BEDGRAPH, FPKM_TRACKING, SGR)
SRA Run SelectorHelp

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