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| Status |
Public on Apr 29, 2020 |
| Title |
Transcriptome analysis of Arabidopsis seedlings between Col-0 and saur41/4071/72 |
| Organism |
Arabidopsis |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
Purpose: we used transcriptional profiling to identify differentially expressed genes in Col-0 and saur41/4071/72 seedlings
Methods: Total RNA of 5-day-old Arabidopsis roots and the shoot parts were send to Vazyme BIotech Co., Ltd (Nanjing, China) to carry out library construction, Illumina HiSeq sequencing, and bioinformatical analysis. Each sample generated 4 Gb of clean data and contained three biological replicates.
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| Overall design |
2 from Col-0 root, 2 from saur41/4071/72 root, 2 from Col-0 shoot part and 2 from saur41/40/71/72 shoot part
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| Contributor(s) |
Qiu T, Qi M, Ding X, Zheng Y |
| Citation(s) |
31585004 |
| |
| Submission date |
Jul 10, 2019 |
| Last update date |
Apr 29, 2020 |
| Contact name |
Ting Qiu |
| Organization name |
Zhejiang University
|
| Department |
college of life science
|
| Street address |
866 Yuhangtang Road
|
| City |
Hangzhou |
| ZIP/Postal code |
310058 |
| Country |
China |
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| Platforms (1) |
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| Samples (8)
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| Relations |
| BioProject |
PRJNA553815 |
| SRA |
SRP214155 |
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