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Series GSE129596 Query DataSets for GSE129596
Status Public on Sep 29, 2019
Title Transcriptome analysis of Enzalutamide-resistant C4-2B (C4-2B MDVR) cells treated with Indocin.
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary The overall goal of this study was to identify genes that were differentially-expressed in C4-2B MDVR cells treated with Indocin. C4-2B MDVR were either treated with Indocin (20 uM) or DMSO vehicle control for 3 days, followed by isolation of total cellular RNA. Transcriptome analysis was performed with RNA-Sequencing (RNA-Seq) in order to identify differentially-expressed genes (DEGs) induced by Indocin treatment.
 
Overall design Two samples were analyzed by RNA-Seq analysis: Indocin (20 uM)-treated C4-2B MDVR cells, and DMSO-treated C4-2B MDVR cells as a control.
 
Contributor(s) Liu C, Gao AC, Tepper CG
Citation(s) 31308078
NIH grant(s)
Grant ID Grant title Affiliation Name
P30 CA093373 Cancer Center Support Grant P30 UNIVERSITY OF CALIFORNIA DAVIS Ralph W. deVere White
Submission date Apr 10, 2019
Last update date Oct 01, 2019
Contact name Clifford G. Tepper
E-mail(s) [email protected]
Phone 916-734-7195
Organization name UC Davis School of Medicine
Department Biochemistry and Molecular Medicine
Street address 4645 2nd Avenue, Room 2300A
City Sacramento
State/province CA
ZIP/Postal code 95817
Country USA
 
Platforms (1)
GPL20301 Illumina HiSeq 4000 (Homo sapiens)
Samples (2)
GSM3716786 C4-2B MDVR DMSO (Indocin Control)
GSM3716787 C4-2B MDVR Indocin
Relations
BioProject PRJNA531908
SRA SRP191846

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE129596_RAW.tar 310.0 Kb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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