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Series GSE127895 Query DataSets for GSE127895
Status Public on Mar 05, 2020
Title Expression data from ABCB5-positive and ABCB5-negative GBM cells
Organism Homo sapiens
Experiment type Expression profiling by array
Summary We analyzed, by HTA 2.0, the GBM cell lines LN-18, LN-229, and U-87 MG after fluoresence-activated cell sorting (FACS) into ABCB5+ and ABCB5- fractions. Poor prognosis associated with glioblastoma multiforme (GBM) results from tumor resistance to therapy and high rate of recurrence. Compelling evidence suggests this is driven by subpopulations of slow-proliferating cancer stem cells with tumor-initiating potential. ATP-binding cassette member B5 (ABCB5) has been identified as a molecular marker for distinct subsets of chemoresistant tumor-initiating cell populations in diverse human malignancies. In the current study, we examined the potential role of ABCB5 in growth and chemoresistance of GBM. We found ABCB5 to be preferentially expressed in clinical GBM tumors and co-expressed with the stem cell marker CD133 in subpopulations of human GBM cell lines U-87 MG, LN-18 and LN-229. Antibody-mediated functional ABCB5 blockade inhibited proliferation and survival of human GBM cells and sensitized them to temozolomide (TMZ)-induced apoptosis. Likewise, in an in vivo GBM xenograft study in immunodeficient mice, anti-ABCB5 monoclonal antibody treatment inhibited tumor growth and sensitized tumors to TMZ therapy. Mechanistically, we demonstrated that ABCB5 regulates cell cycle checkpoint molecules to revoke drug-induced G2-M arrest and augments drug-mediated cell death. Overall, our data establish ABCB5 as a marker of GBM chemoresistance and point to the potential of ABCB5 targeting in improvement of current GBM therapies.
 
Overall design Three GBM cell lines were FACS sorted for ABCB5 using anti-ABCB5 mAb clone 3C2-1D12. The sorted populations were collected for RNA extraction and microarray analysis.
 
Contributor(s) Lee CA, Frank NY
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Submission date Mar 05, 2019
Last update date Mar 06, 2020
Contact name Natasha Frank
Organization name Brigham and Women's Hospital
Department Medicine
Lab Natasha Frank
Street address 77 Avenue Louis Pasteur
City Boston
State/province MA
ZIP/Postal code 02115
Country USA
 
Platforms (1)
GPL17586 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
Samples (6)
GSM3656120 LN229.ABCB5+
GSM3656121 LN229.ABCB5-
GSM3656122 U87MG.ABCB5+
Relations
BioProject PRJNA525717

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE127895_RAW.tar 145.5 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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