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Series GSE126974 Query DataSets for GSE126974
Status Public on Jun 24, 2019
Title TOX is a critical regulator of tumour-specific T cell differentiation
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 31207604
Submission date Feb 23, 2019
Last update date Jul 10, 2019
Contact name Andrea Schietinger
Organization name Memorial Sloan Kettering Cancer Center
Department Immunology
Street address 1275 York Avenue
City New York
State/province NY
ZIP/Postal code 10065
Country USA
 
Platforms (2)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
GPL21103 Illumina HiSeq 4000 (Mus musculus)
Samples (33)
GSM3619217 ATAC (CD8+/Thy1.1+/PD1lo/LAG3lo/CD39lo) TCR SV40-I CD8 T cells isolated D8-9 from malignant liver lesions replicate#2
GSM3619218 ATAC (CD8+/Thy1.1+/PD1lo/LAG3lo/CD39lo) TCR SV40-I CD8 T cells isolated D8-9 from malignant liver lesions replicate#3
GSM3619219 ATAC (CD8/CD44low) naïve transgenic TCR SV40-I CD8 T cells replicate#1
This SuperSeries is composed of the following SubSeries:
GSE126970 ATACseq profiling of various TOX+ and TOX- tumor-infiltrating CD8 T cells
GSE126973 Transcriptome analysis of various TOX+ and TOX- tumor-infiltrating CD8 T cells and in vitro TOX over-expressing T cells.
Relations
BioProject PRJNA523935

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE126974_RAW.tar 5.4 Gb (http)(custom) TAR (of BW, TXT)
SRA Run SelectorHelp
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