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Series GSE12619 Query DataSets for GSE12619
Status Public on Aug 28, 2009
Title Heat shock response of til1-1 mutant plants
Organism Arabidopsis thaliana
Experiment type Expression profiling by array
Summary Several lipocalin genes from higher plants were shown to be responsive to both high and low temperature stresses and have been named as temperature-induced lipocalin (Til). In this study, a reverse genetic approach was taken to elucidate the role of Arabidopsis Til1 (At5g58070) in thermotolerance. We showed that Til1 proteins was constitutively expressed and increased significantly after heat shock treatment. A T-DNA knockout line of Til1, designated as til1-1, could not produce Til1 and showed severe defects in basal and acquired thermotolerance. Introducing a wild type copy of Til1 gene into til1-1 complemented the mutant phenotype. Over-expression of Til1 in the wild type plant did not enhance thermotolerance. Til1 is peripherally associated with plasma membrane, suggesting a regulatory or protective role of this protein in membrane function. Transcriptomic analysis showed that the heat shock response in til1-1 was not altered as compared to the wild type plants. The temperature threshold for heat shock protein induction was not affected by the level of Til1. Ion leakage analysis revealed no significant difference in membrane stability between the wild type and til1-1 seedlings. These results suggested that Til1 is not involved in regulating membrane fluidity or stability. Nevertheless, the level of malondialdehyde was significantly higher in til1-1 than in the wild type after severe heat treatment. The mutant plants were also more sensitive than the wild type to tert-butyl hydroperoxide, a reagent that induces lipid peroxidation. Taken together, our data indicate that Til1 is an essential component for thermotolerance probably by acting against lipid peroxidation induced by severe heat stress.
 
Overall design Total RNA was isolated from the seedlings of 7-d old wild-type and til1-1 mutant seedlings (a pool of about 100 plants per treatment in duplicates) harvested immediately after heat shock treatment. In this experiment, total 8 chips were used, 1 each for 2 biological replicates of the control and HS-treated samples for the wild type and mutant plants.
 
Contributor(s) Chi W, Fung RW, Liu H, Hsu C, Charng Y
Citation(s) 19302169
Submission date Aug 29, 2008
Last update date Aug 28, 2018
Contact name Yee-yung Charng
E-mail(s) [email protected]
Organization name Academia Sinica
Department Agric. Biotech. Res. Center
Lab Yee-yung Charng
Street address 128, Academia Rd. Sec. 2
City Taipei
ZIP/Postal code 11529
Country Taiwan
 
Platforms (1)
GPL198 [ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array
Samples (8)
GSM315970 Col-0_22C_rep1
GSM315971 Col-0_22C_rep2
GSM315972 Col-0_37C_rep1
Relations
BioProject PRJNA113083

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE12619_RAW.tar 17.4 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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