NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE125135 Query DataSets for GSE125135
Status Public on Jan 16, 2019
Title sRNA sequencing of miRNAs exported to HDL from INS-1 rat insulinoma cells
Organism Rattus norvegicus
Experiment type Non-coding RNA profiling by high throughput sequencing
Summary miRNAs are exported to high density lipoproteins (HDL). This study aimed to understand what miRNAs are exported from INS-1 cells to HDL in vitro.
 
Overall design Examination of miRNAs exported from INS1 cells to HDL
 
Contributor(s) Sedgeman L, Vickers K
Citation(s) 30846744
Submission date Jan 15, 2019
Last update date Apr 17, 2019
Contact name Leslie Roteta Sedgeman
Organization name Vanderbilt University
Street address 2220 Pierce Avenue
City Nashville
State/province TN
ZIP/Postal code 37232
Country USA
 
Platforms (1)
GPL18694 Illumina HiSeq 2500 (Rattus norvegicus)
Samples (2)
GSM3564144 miRNAs on baseline HDL (cellfree(cf)-nHDL)
GSM3564145 miRNAs export to HDL from INS-1 cells (INS-1-nHDL)
Relations
BioProject PRJNA515308
SRA SRP179649

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE125135_After_11_vs_Before_09_min5_pvalue0.05_DESeq2.csv.gz 5.5 Kb (ftp)(http) CSV
GSE125135_lesliesedgeman1_-_processed_file_-_reads.csv.gz 9.7 Kb (ftp)(http) CSV
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap