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Series GSE121315 Query DataSets for GSE121315
Status Public on Nov 19, 2019
Title Effect of Neutrophil Extracellular Traps and Psoriasis-Associated TRAF3IP2 Genotype on Induction of Human Th17 Cells
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Using RNA-sesq to assess effects of NET exposure under different activation conditions, and assessing effects of homozygosity vs. nullizygosity for the Act1 D10N genotype
 
Overall design PBMC from 12 different individuals of known Act1 genotype were subjected to 4 conditions (Control; CD3/CD28; NET; NET+LPS) at 2 different times (0h and 6h PMA/lonomycin).
 
Contributor(s) Lambert S, Tsoi LC, Nair R, Elder JT
Citation(s) 30528823
Submission date Oct 16, 2018
Last update date Nov 19, 2019
Contact name Lam Tsoi
E-mail(s) [email protected]
Organization name University of Michigan
Street address Medical Sciences 1 Bldg. 1301 E. Catherine
City Ann Arbor
State/province MI
ZIP/Postal code 48109
Country USA
 
Platforms (1)
GPL21697 NextSeq 550 (Homo sapiens)
Samples (92)
GSM3431283 96635
GSM3431284 96636
GSM3431285 96637
Relations
BioProject PRJNA497059
SRA SRP165864

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE121315_countmatrix.txt.gz 2.5 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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