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Series GSE120292 Query DataSets for GSE120292
Status Public on Sep 22, 2018
Title Chromatin immunoprecipitation sequencing of VgrR–DNA-binding landscapes
Organism Xanthomonas campestris pv. campestris str. 8004
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary ChIP-seq database identifies genes with promoter regions bound by VgrR in X. campestris pv. campestris grown under osmostress conditions
 
Overall design Examination of VgrR–DNA-binding landscapes in the genome of X. campestris pv. campestris 8004 between the WT strain and prc mutant both grown under osmostress conditions.
 
Contributor(s) Deng C, Zhang H, Qian W
Citation(s) 30442885
Submission date Sep 21, 2018
Last update date Nov 30, 2018
Contact name ChaoYing Deng
E-mail(s) [email protected]
Phone +861064806152
Organization name Chinese Academy of Sciences
Street address No. 1 Beichen West Road, Chaoyang District
City BeiJing
State/province BeiJing
ZIP/Postal code 100101
Country China
 
Platforms (1)
GPL25598 Illumina HiSeq 2000 (Xanthomonas campestris pv. campestris str. 8004)
Samples (2)
GSM3397750 WT CvgrR-his
GSM3397751 DLTPrc CvgrR-his
Relations
BioProject PRJNA492409
SRA SRP162320

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE120292_RAW.tar 3.2 Mb (http)(custom) TAR (of WIG)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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