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Series GSE119295 Query DataSets for GSE119295
Status Public on Sep 26, 2019
Title Comprehensive transcriptomic profiling of breast cancer patients in SweBCG 91-RT
Organism Homo sapiens
Experiment type Expression profiling by array
Summary We performed a retrospective analysis of the SweBCG 91-RT trial, which randomized women with node-negative stage I-IIA breast cancer to whole breast radiotherapy or no radiotherapy following breast-conserving surgery with minimal use of adjuvant systemic treatment.
Primary tumors were profiled with the GeneChip Human Exon 1.0 ST microarray.
 
Overall design RNA was isolated from FFPE tissue specimens of the SweBCG 91-RT trial and whole transcriptome profiling was performed. Profiling was successful for 765 patients.
 
Contributor(s) Sjöström M, Chang SL, Fishbane N, Davicioni E, Hartman L, Holmberg E, Feng FY, Speers CW, Pierce LJ, Malmström P, Fernö M, Karlsson P
Citation(s) 35140341, 36599119, 37071498, 37208129
Submission date Aug 30, 2018
Last update date Aug 11, 2023
Contact name Laura Chang
Organization name PFS Genomics
Street address 1152 Mainland St, Suite 430
City Vancouver
State/province BC
ZIP/Postal code V6B 4X2
Country Canada
 
Platforms (1)
GPL22995 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [transcript (gene) version, custom CDF]
Samples (765)
GSM3368770 breast_cancer_primary_sample_1
GSM3368771 breast_cancer_primary_sample_2
GSM3368772 breast_cancer_primary_sample_3
Relations
BioProject PRJNA488789

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE119295_RAW.tar 15.1 Gb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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