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Series GSE118338 Query DataSets for GSE118338
Status Public on Feb 19, 2020
Title Long heat stress induced RNA dynamics in Arabidopsis
Organism Arabidopsis thaliana
Experiment type Expression profiling by high throughput sequencing
Summary Heat stress is a common stress for plants. Long heat stress can triger a series of biological responses. RNA-seq is a useful method to profile RNA dynamics in creatures. Here we profiles the RNA dynamics in heat stressed Arabidopsis. These data will help us understanding the stress response mechanism in plants.
 
Overall design Total RNA-seq of Arabidopsis 7-day-old seedlings. LHS (long heat stress) samples were treated by 37°C 30 hours. LHSR12 (long heat stress recovery 12 hours) samples recovered under normal condition (22°C) for 12 hours after long heat stress. LHSR84 (long heat stress recovery 84 hours) samples recovered under normal condition (22°C) for 84 hours after long heat stress.
 
Contributor(s) Hou Q, Li K, Xu W, Sun Q
Citation(s) 32075864
Submission date Aug 09, 2018
Last update date Mar 11, 2020
Contact name li kuan
E-mail(s) [email protected]
Organization name Tsinghua University
Street address zhongguancun
City Beijing
ZIP/Postal code 100084
Country China
 
Platforms (1)
GPL23157 HiSeq X Ten (Arabidopsis thaliana)
Samples (8)
GSM3325566 RNA-CTRL-7d-1
GSM3325567 RNA-CTRL-7d-2
GSM3325568 RNA-LHS-1
Relations
BioProject PRJNA485260
SRA SRP156877

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE118338_gene_expression.txt.gz 1.6 Mb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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