NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE115787 Query DataSets for GSE115787
Status Public on Jun 18, 2019
Title The MybMuvB complex is required for YAP dependent transcription of mitotic genes
Organisms Homo sapiens; Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by high throughput sequencing
Summary YAP/TAZ, downstream effectors of the Hippo pathway, are important regulators of proliferation. Here we show that the ability of YAP to activate mitotic gene expression is dependent on the Myb-MuvB (MMB) complex, a master regulator of genes expressed in the G2/M phase of the cell cycle. By carrying out genome-wide expression and binding analyses, we found that YAP promotes binding of the MMB subunit B-MYB to the promoters of mitotic target genes. YAP binds to B-MYB and stimulates B-MYB chromatin-association through distal enhancer elements that interact with MMB-regulated promoters through chromatin looping. The cooperation between YAP and B-MYB is critical for YAP-mediated entry into mitosis. Furthermore, the expression of genes co-activated by YAP and B-MYB is associated with poor survival of cancer patients. Together, our findings provide a molecular mechanism by which YAP and MMB regulate mitotic gene expression and suggest a link between two cancer-relevant signaling pathways.
 
Overall design ChIP-seq of LIN9, YAP, B-MYB and histone marks in murine lung adenocarcinoma cells (KPL) and in human MCF10A-YAP5SA cells.
Gene expression changes upon Lin9-depletion in KPL cells were measured with RNA-seq.
 
Contributor(s) Pattschull G, Walz S, Ruehl E, Wolf E, Ade CP, Kneitz S, Rosenwald A, von Eyss B, Gaubatz S
Citation(s) 31216474
Submission date Jun 13, 2018
Last update date Jun 27, 2019
Contact name Stefan Gaubatz
E-mail(s) [email protected]
Organization name University of Wuerzburg
Department Physiological Chemistry
Lab Gaubatz
Street address Am Hubland
City Wuerzburg
ZIP/Postal code 97074
Country Germany
 
Platforms (2)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (33)
GSM3189809 ChIPseq_KPL_input_minusOHT
GSM3189810 ChIPseq_KPL_input_plusOHT
GSM3189811 ChIPseq_KPL_Lin9_minusOHT
Relations
BioProject PRJNA476018
SRA SRP150501

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE115787_RAW.tar 4.0 Gb (http)(custom) TAR (of BEDGRAPH)
GSE115787_RNAseq_KPL_countmatrix.txt.gz 967.7 Kb (ftp)(http) TXT
GSE115787_RNAseq_KPL_plusOHT_vs_minusOHT.txt.gz 804.2 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap