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| Status |
Public on Apr 24, 2008 |
| Title |
Iron deficiency (-Fe) effect: Arabidopsis roots |
| Organism |
Arabidopsis thaliana |
| Experiment type |
Expression profiling by array
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| Summary |
This SuperSeries is composed of the SubSeries listed below.
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| Overall design |
Refer to individual Series
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| Citation(s) |
18436742 |
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| Submission date |
Feb 20, 2008 |
| Last update date |
Aug 28, 2018 |
| Contact name |
Terri Anita Long |
| E-mail(s) |
[email protected]
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| Phone |
919-613-8202
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| Fax |
919-613-8177
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| Organization name |
Duke University
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| Department |
Biology
|
| Lab |
Philip Benfey
|
| Street address |
Box 90338
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| City |
Durham |
| State/province |
NC |
| ZIP/Postal code |
27707 |
| Country |
USA |
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| Platforms (1) |
| GPL198 |
[ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array |
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| Samples (52)
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| GSM265411 |
Arabidopsis, whole roots, -Fe, replicate 1 |
| GSM265412 |
Arabidopsis, whole roots, -Fe, replicate 2 |
| GSM265413 |
Arabidopsis, whole roots, -Fe, replicate 3 |
| GSM265414 |
Arabidopsis, root cells, -Fe, replicate 1 |
| GSM265415 |
Arabidopsis, root cells, -Fe, replicate 2 |
| GSM265416 |
Arabidopsis, root cells, -Fe, replicate 3 |
| GSM265418 |
Arabidopsis, root, longitudinal zone 1, standard conditions, rep 1 |
| GSM265419 |
Arabidopsis, root, longitudinal zone 1, standard conditions, rep 2 |
| GSM265420 |
Arabidopsis, root, longitudinal zone 2, standard conditions, rep 1 |
| GSM265421 |
Arabidopsis, root, longitudinal zone 2, standard conditions, rep 2 |
| GSM265422 |
Arabidopsis, root, longitudinal zone 3, standard conditions, rep1 |
| GSM265423 |
Arabidopsis, root, longitudinal zone 3, standard conditions, rep 2 |
| GSM265424 |
Arabidopsis, root, longitudinal zone 4, standard conditions, rep 1 |
| GSM265425 |
Arabidopsis, root, longitudinal zone 4, standard conditions, rep 2 |
| GSM265426 |
Arabidopsis, root, longitudinal zone 1, -Fe conditions, rep 1 |
| GSM265427 |
Arabidopsis, root, longitudinal zone 1, -Fe conditions, rep 2 |
| GSM265428 |
Arabidopsis, root, longitudinal zone 2, -Fe conditions, rep 1 |
| GSM265429 |
Arabidopsis, root, longitudinal zone 2, -Fe conditions, rep 2 |
| GSM265430 |
Arabidopsis, root, longitudinal zone 3, -Fe conditions, rep 1 |
| GSM265431 |
Arabidopsis, root, longitudinal zone 3, -Fe conditions, rep 2 |
| GSM265432 |
Arabidopsis, root, longitudinal zone 4, -Fe conditions, rep 1 |
| GSM265433 |
Arabidopsis, root, longitudinal zone 4, -Fe conditions, rep 2 |
| GSM265461 |
Arabidopsis, whole roots, standard conditions, rep 1 |
| GSM265462 |
Arabidopsis, whole roots, standard conditions, rep 2 |
| GSM265463 |
Arabidopsis, whole roots, -Fe, 3 hour, rep 1 |
| GSM265464 |
Arabidopsis, whole roots, -Fe, 3 hour, rep 2 |
| GSM265465 |
Arabidopsis, whole roots, -Fe, 6 hour, rep 1 |
| GSM265466 |
Arabidopsis, whole roots, -Fe, 6 hour, rep 2 |
| GSM265467 |
Arabidopsis, whole roots, -Fe, 12 hour, rep 1 |
| GSM265468 |
Arabidopsis, whole roots, -Fe, 12 hour, rep 2 |
| GSM265469 |
Arabidopsis, whole roots, -Fe, 24 hour, rep 1 |
| GSM265470 |
Arabidopsis, whole roots, -Fe, 24 hour, rep 2 |
| GSM265471 |
Arabidopsis, whole roots, -Fe, 48 hour, rep 1 |
| GSM265472 |
Arabidopsis, whole roots, -Fe, 48 hour, rep 2 |
| GSM265473 |
Arabidopsis, whole roots, -Fe, 72 hour, rep 1 |
| GSM265474 |
Arabidopsis, whole roots, -Fe, 72 hour, rep 2 |
| GSM266662 |
Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 1 |
| GSM266663 |
Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 2 |
| GSM266664 |
Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 3 |
| GSM266665 |
Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 4 |
| GSM266666 |
Arabidopsis, root cells, columella root cap, -Fe, replicate 1 |
| GSM266667 |
Arabidopsis, root cells, columella root cap, -Fe, replicate 2 |
| GSM266668 |
Arabidopsis, root cells, columella root cap, -Fe, replicate 3 |
| GSM266669 |
Arabidopsis, root cells, cortex, -Fe, replicate 1 |
| GSM266670 |
Arabidopsis, root cells, cortex, -Fe, replicate 2 |
| GSM266671 |
Arabidopsis, root cells, cortex, -Fe, replicate 3 |
| GSM266672 |
Arabidopsis, root cells, endodermis and quiescent center, -Fe, replicate 1 |
| GSM266673 |
Arabidopsis, root cells, endodermis and quiescent center, -Fe, replicate 2 |
| GSM266674 |
Arabidopsis, root cells, endodermis and quiescent center, -Fe, replicate 3 |
| GSM266675 |
Arabidopsis, root cells, stele, -Fe, replicate 1 |
| GSM266676 |
Arabidopsis, root cells, stele, -Fe, replicate 2 |
| GSM266677 |
Arabidopsis, root cells, stele, -Fe, replicate 3 |
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| This SuperSeries is composed of the following SubSeries:
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| GSE10496 |
Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe) |
| GSE10497 |
Expression analysis of root developmental zones after iron deficiency (-Fe) treatment |
| GSE10501 |
Expression analysis of root cell-types after iron deficiency (-Fe) treatment |
| GSE10502 |
Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis roots |
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| Relations |
| BioProject |
PRJNA107839 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE10576_RAW.tar |
168.7 Mb |
(http)(custom) |
TAR (of CEL, CHP) |
| Raw data provided as supplementary file |
| Processed data included within Sample table |
| Processed data provided as supplementary file |
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