 |
 |
GEO help: Mouse over screen elements for information. |
|
| Status |
Public on Apr 30, 2010 |
| Title |
microRNA156 resistant SQUAMOSA-PROMOTER-BINDING PROTEIN-LIKE13 (mSPL13) seedlings |
| Organism |
Arabidopsis thaliana |
| Experiment type |
Expression profiling by array
|
| Summary |
The expression profiles were determined using Affymetrix ATH1 arrays.
Comparisons among the Col-0, SPL13 and mSPL13 sample groups allow the identification of genes regulated by SPL13.
Keywords: Potential upregulated and downregulated genes
|
| |
|
| Overall design |
Arabidopsis 3 days seedling from three independent biological replicates of Col-0, SPL13 and mSPL13 samples, which contain three independent seed lots each, were analyzed.
|
| |
|
| Contributor(s) |
Martin RC, Asahina M, Liu P, Kristof JR, Coppersmith JL, Nonogaki H |
| Citation |
Martin RC, Asahina M, Liu P-P, Kristof JR, Coppersmith JL, Pluskota WE, Bassel GW, Goloviznina NA, Nguyen TT, Martinez-Andujar C, Kumar MBA, Pupel P, Nonogaki H. 2010. The microRNA156 and microRNA172 gene regulation cascades at post-germinative stages in Arabidopsis. Seed Science Research (2010), 20:79-87. doi:10.1017/S0960258510000085.
Martin RC, Asahina M, Liu P-P, Kristof JR, Coppersmith JL, Pluskota WE, Bassel GW, Goloviznina NA, Nguyen TT, Martinez-Andujar C, Kumar MBA, Pupel P, Nonogaki H. 2010. The regulation of post-germinative transition from the cotyledon- to vegetative-leaf stages by microRNA-targeted SQUAMOSA PROMOTER-BINDING PROTEIN LIKE13 in Arabidopsis. Seed Science Research (2010), 20:89-96. doi:10.1017/S0960258510000073.
|
| |
| Submission date |
Feb 06, 2008 |
| Last update date |
Jun 12, 2017 |
| Contact name |
Hiro Nonogaki |
| E-mail(s) |
[email protected]
|
| Phone |
541 737 8885
|
| Fax |
541 737 3479
|
| URL |
http://hort.oregonstate.edu/isb/
|
| Organization name |
Oregon State University
|
| Department |
Horticulture
|
| Lab |
Hiro Nonogaki
|
| Street address |
4017 ALS Bldg, Dept. of Horticulture, Oregon State University
|
| City |
Corvallis |
| State/province |
OR |
| ZIP/Postal code |
97331 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL198 |
[ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array |
|
| Samples (9)
|
| GSM263144 |
Arabidopsis seedling, SPL13, rep1 |
| GSM263145 |
Arabidopsis seedling, SPL13, rep2 |
| GSM263146 |
Arabidopsis seedling, SPL13, rep3 |
| GSM263147 |
Arabidopsis seedling, mSPL13, rep1 |
| GSM263148 |
Arabidopsis seedling, mSPL13, rep2 |
| GSM263149 |
Arabidopsis seedling, mSPL13, rep3 |
|
| Relations |
| BioProject |
PRJNA108057 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE10414_RAW.tar |
19.3 Mb |
(http)(custom) |
TAR (of CEL) |
| Processed data included within Sample table |
|
|
|
|
 |
Less...
More...