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Series GSE102347 Query DataSets for GSE102347
Status Public on Dec 25, 2018
Title Expression data in Esherichia coli wild type and ∆dnaK
Platform organisms Escherichia coli O157:H7 str. EDL933; Escherichia coli CFT073; Escherichia coli O157:H7 str. Sakai; Escherichia coli str. K-12 substr. MG1655
Sample organism Escherichia coli
Experiment type Expression profiling by array
Summary We found that nemerous genes were up- or down regulated in ∆dnaK, including RpoS-regulated genes.
 
Overall design To compare gene expression profile, E. coli strains were grown at 30C for 48 h in YESCA medium under static conditions for RNA extraction and hybridization on Agilent microarrays.
 
Contributor(s) Sugimoto S, Arita-Morioka K
Citation(s) 30271935
Submission date Aug 07, 2017
Last update date Jul 25, 2021
Contact name Shinya Sugimoto
E-mail(s) [email protected]
Organization name The Jikei University School of Medicine
Department Department of Bacteriology
Street address 3-25-8 Nishi-Shimbashi
City Tokyo
ZIP/Postal code 105-8461
Country Japan
 
Platforms (1)
GPL13360 Agilent-020097 E. coli Gene Expression Microarray (Feature Number version)
Samples (4)
GSM2735164 WT-biofilm-replicate1
GSM2735165 WT-biofilm-replicate2
GSM2735166 KO-biofilm-replicate1
Relations
BioProject PRJNA397483

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE102347_RAW.tar 2.9 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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