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Status
Public on Feb 27, 2004
Title
PSU_Yeast6000_V1
Technology type
spotted DNA/cDNA
Distribution
non-commercial
Organism
Saccharomyces cerevisiae
Description
PCR amplified yeast ORF chip from strain S288C with ResGen Primer Pairs; Amplification as described at http://cmgm.stanford.edu/pbrown/protocols/2_DNA.html Printed on aminosaline glass slides by the Penn State University Microarray facility; Tip Configuration: Standard 16-tip; Columns per block: 20; Column spacing: 225 microns Row spacing: 225 microns Keywords = spotted Yeast ORF
Contributor(s)
Huisinga KL
Submission date
Nov 24, 2003
Last update date
May 26, 2005
Contact name
B. Franklin Pugh
E-mail(s)
[email protected] , [email protected]
Organization name
Cornell University
Department
Molecular Biology and Genetics
Lab
B. Franklin Pugh
Street address
465 Biotechnology Bldg.
City
Ithaca
State/province
NY
ZIP/Postal code
14853
Country
USA
Samples (96)
GSM13002 , GSM13013 , GSM13014 , GSM13015 , GSM13016 , GSM13017
GSM13018 ,
GSM13019 ,
GSM13020 ,
GSM13021 ,
GSM13022 ,
GSM13023 ,
GSM13024 ,
GSM13025 ,
GSM13026 ,
GSM13027 ,
GSM13028 ,
GSM13029 ,
GSM13030 ,
GSM13031 ,
GSM13032 ,
GSM13033 ,
GSM13034 ,
GSM13035 ,
GSM13036 ,
GSM13037 ,
GSM13038 ,
GSM13039 ,
GSM13040 ,
GSM13041 ,
GSM177676 ,
GSM177677 ,
GSM177678 ,
GSM177679 ,
GSM177680 ,
GSM177681 ,
GSM177682 ,
GSM177683 ,
GSM177692 ,
GSM177693 ,
GSM177694 ,
GSM177695 ,
GSM177696 ,
GSM177697 ,
GSM177698 ,
GSM177699 ,
GSM177700 ,
GSM177701 ,
GSM177702 ,
GSM177703 ,
GSM177704 ,
GSM177705 ,
GSM177706 ,
GSM177707 ,
GSM177708 ,
GSM177709 ,
GSM177710 ,
GSM177711 ,
GSM177712 ,
GSM177713 ,
GSM177714 ,
GSM177715 ,
GSM177716 ,
GSM177717 ,
GSM177718 ,
GSM177719 ,
GSM177720 ,
GSM177721 ,
GSM177722 ,
GSM177723 ,
GSM177724 ,
GSM177734 ,
GSM177735 ,
GSM177736 ,
GSM177737 ,
GSM177738 ,
GSM177739 ,
GSM177740 ,
GSM177741 ,
GSM177743 ,
GSM177744 ,
GSM177745 ,
GSM177746 ,
GSM177747 ,
GSM177748 ,
GSM177749 ,
GSM177750 ,
GSM177751 ,
GSM177752 ,
GSM177753 ,
GSM177754 ,
GSM177755 ,
GSM760768 ,
GSM760769 ,
GSM760770 ,
GSM760771
Series (3)
GSE885
Genome-wide regulation by TFIID and SAGA
GSE7385
A TATA binding protein regulatory network
GSE30675
A new, highly conserved domain in Swi2/Snf2 is required for SWI/SNF remodeling
Data table header descriptions
ID
unique spot identifier
ORF
spot name "
SPOT_ID
controls
Block
Block of spot print location
Row
Row of spot print location
Column
column of spot print location
Failed
0 is good pcr, 1 is failed pcr
Data table
ID
ORF
SPOT_ID
Block
Row
Column
Failed
1
S288C
1
1
1
0
2
S288C
1
1
2
0
3
S288C
1
1
3
0
4
S288C
1
1
4
0
5
S288C
1
1
5
0
6
S288C_0.5x
1
1
6
0
7
S288C_0.25x
1
1
7
0
8
S288C_0.125x
1
1
8
0
9
tRNA
1
1
9
0
10
tRNA
1
1
10
0
11
tRNA+S288C_0.5x
1
1
11
0
12
tRNA+S288C_0.25x
1
1
12
0
13
tRNA+S288C_0.125x
1
1
13
0
14
W303
1
1
14
0
15
3xSSC
1
1
15
0
16
YBR012W-B
1
1
16
0
17
YBR028C
1
1
17
0
18
YBR044C
1
1
18
0
19
YBR060C
1
1
19
0
20
YBR076W
1
1
20
0
Total number of rows: 6400 Table truncated, full table size 146 Kbytes .
Supplementary data files not provided