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Platform GPL739 Query DataSets for GPL739
Status Public on Feb 27, 2004
Title PSU_Yeast6000_V1
Technology type spotted DNA/cDNA
Distribution non-commercial
Organism Saccharomyces cerevisiae
 
Description PCR amplified yeast ORF chip from strain S288C with ResGen Primer Pairs; Amplification as described at http://cmgm.stanford.edu/pbrown/protocols/2_DNA.html
Printed on aminosaline glass slides by the Penn State University Microarray facility; Tip Configuration: Standard 16-tip; Columns per block: 20; Column spacing: 225 microns Row spacing: 225 microns
Keywords = spotted Yeast ORF
 
Contributor(s) Huisinga KL
Submission date Nov 24, 2003
Last update date May 26, 2005
Contact name B. Franklin Pugh
E-mail(s) [email protected], [email protected]
Organization name Cornell University
Department Molecular Biology and Genetics
Lab B. Franklin Pugh
Street address 465 Biotechnology Bldg.
City Ithaca
State/province NY
ZIP/Postal code 14853
Country USA
 
Samples (96) GSM13002, GSM13013, GSM13014, GSM13015, GSM13016, GSM13017 
Series (3)
GSE885 Genome-wide regulation by TFIID and SAGA
GSE7385 A TATA binding protein regulatory network
GSE30675 A new, highly conserved domain in Swi2/Snf2 is required for SWI/SNF remodeling

Data table header descriptions
ID unique spot identifier
ORF spot name "
SPOT_ID controls
Block Block of spot print location
Row Row of spot print location
Column column of spot print location
Failed 0 is good pcr, 1 is failed pcr

Data table
ID ORF SPOT_ID Block Row Column Failed
1 S288C 1 1 1 0
2 S288C 1 1 2 0
3 S288C 1 1 3 0
4 S288C 1 1 4 0
5 S288C 1 1 5 0
6 S288C_0.5x 1 1 6 0
7 S288C_0.25x 1 1 7 0
8 S288C_0.125x 1 1 8 0
9 tRNA 1 1 9 0
10 tRNA 1 1 10 0
11 tRNA+S288C_0.5x 1 1 11 0
12 tRNA+S288C_0.25x 1 1 12 0
13 tRNA+S288C_0.125x 1 1 13 0
14 W303 1 1 14 0
15 3xSSC 1 1 15 0
16 YBR012W-B 1 1 16 0
17 YBR028C 1 1 17 0
18 YBR044C 1 1 18 0
19 YBR060C 1 1 19 0
20 YBR076W 1 1 20 0

Total number of rows: 6400

Table truncated, full table size 146 Kbytes.






Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary data files not provided

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