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Platform GPL58 Query DataSets for GPL58
Status Public on Feb 12, 2002
Title y74
Technology type spotted DNA/cDNA
Distribution non-commercial
Organism Saccharomyces cerevisiae
 
Description Tip Configuration: Standard 4-tip
Columns per Sector: 43
Column Spacing: 175
Row Spacing: 175
 
Submission date Feb 08, 2002
Last update date May 27, 2005
Organization Stanford Microarray Database (SMD)
E-mail(s) [email protected]
Phone 650-498-6012
URL http://genome-www5.stanford.edu/
Department Stanford University, School of Medicine
Street address 300 Pasteur Drive
City Stanford
State/province CA
ZIP/Postal code 94305
Country USA
 
Samples (5) GSM904, GSM905, GSM1093, GSM1094, GSM79616
Series (3)
GSE29 Adaptive evolution in yeast
GSE3496 Iron uptake in yeast
GSE4196 Iron uptake experiments in yeast

Data table header descriptions
ID unique spot identifier
ORF spot name
GENE_NAME gene name
CHROMOSOME chromosome number
STRAND genomic DNA strand upon which gene sequence is placed
BEG_COORD beginning coordinate of gene sequence on genomic DNA
END_COORD ending coordinate of gene sequence on genomic DNA
PROCESS gene process
FUNCTION gene function
DS_GENE_1
DS_GENE_2
SECTOR sector of spot print location
SECTORROW sector row of spot print location
SECTORCOL sector column of spot print location
PLATE clone plate number
PROW clone plate row
PCOL clone plate column
FAILED
IS_CONTAMINATED

Data table
ID ORF GENE_NAME CHROMOSOME STRAND BEG_COORD END_COORD PROCESS FUNCTION DS_GENE_1 DS_GENE_2 SECTOR SECTORROW SECTORCOL PLATE PROW PCOL FAILED IS_CONTAMINATED
1 GENOMIC 1X 1 1 1 1 A 1 1 U
2 GENOMIC 1X 1 1 2 1 A 3 1 U
3 GENOMIC 0.25X 1 1 3 1 A 5 1 U
4 GENOMIC 0.25X 1 1 4 1 A 7 1 U
5 POLY A 1 1 5 1 A 9 1 U
6 POLY A 1 1 6 1 A 11 1 U
7 SS DNA 1 1 7 1 C 1 1 U
8 SS DNA 1 1 8 1 C 3 1 U
9 3XSSC 1 1 9 1 C 5 1 U
10 3XSSC 1 1 10 1 C 7 1 U
11 3XSSC 1 1 11 1 C 9 1 U
12 3XSSC 1 1 12 1 C 11 1 U
13 3XSSC 1 1 13 1 E 1 1 U
14 3XSSC 1 1 14 1 E 3 1 U
15 GENOMIC 0.5X 1 1 15 1 E 5 1 U
16 GENOMIC 0.5X 1 1 16 1 E 7 1 U
17 3XSSC 1 1 17 1 E 9 1 U
18 3XSSC 1 1 18 1 E 11 1 U
19 3XSSC 1 1 19 1 G 1 1 U
20 3XSSC 1 1 20 1 G 3 1 U

Total number of rows: 7392

Table truncated, full table size 760 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary data files not provided
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