GEO help: Mouse over screen elements for information.
Status
Public on Oct 28, 2007
Title
tiling-mouse-385K-v1.0
Technology type
spotted oligonucleotide
Distribution
non-commercial
Organism
Mus musculus Manufacturer
NimbleGen Systems
Manufacture protocol
NimbleGen manufactures custom, high-density DNA arrays based on its proprietary Maskless Array Synthesizer (MAS) technology. The MAS system is a bench top, solid-state, high-density DNA array fabrication instrument comprised of a maskless light projector, a reaction chamber, a personal computer, and a DNA synthesizer. NimbleGen builds its arrays using photo-mediated synthesis chemistry with its MAS system. See http://www.nimblegen.com/technology/manufacture.html for more details.
Submission date
Aug 27, 2007
Last update date
Oct 28, 2007
Contact name
Ira M Hall
E-mail(s)
[email protected] Phone
516-287-3764
Organization name
Cold Spring Harbor Laboratory
Lab
Hall
Street address
1 Bungtown Road
City
Cold Spring Harbor
State/province
NY
ZIP/Postal code
11724
Country
USA
Samples (68)
GSM225066 , GSM225067 , GSM225068 , GSM225069 , GSM225070 , GSM225071
GSM225072 ,
GSM225073 ,
GSM225074 ,
GSM225075 ,
GSM225076 ,
GSM225077 ,
GSM225078 ,
GSM225079 ,
GSM225080 ,
GSM225081 ,
GSM225082 ,
GSM225083 ,
GSM225084 ,
GSM225085 ,
GSM225086 ,
GSM225087 ,
GSM225088 ,
GSM225089 ,
GSM225090 ,
GSM225091 ,
GSM225092 ,
GSM225093 ,
GSM225094 ,
GSM225095 ,
GSM225096 ,
GSM225097 ,
GSM225098 ,
GSM225099 ,
GSM225100 ,
GSM225101 ,
GSM225102 ,
GSM225103 ,
GSM225104 ,
GSM225105 ,
GSM225106 ,
GSM225107 ,
GSM225108 ,
GSM225109 ,
GSM225110 ,
GSM225111 ,
GSM225112 ,
GSM225113 ,
GSM225114 ,
GSM225115 ,
GSM225116 ,
GSM225117 ,
GSM225118 ,
GSM225119 ,
GSM225120 ,
GSM225121 ,
GSM225122 ,
GSM225123 ,
GSM225124 ,
GSM225125 ,
GSM225126 ,
GSM225127 ,
GSM225128 ,
GSM225129 ,
GSM225130 ,
GSM225131 ,
GSM225132 ,
GSM225133 Series (1)
GSE8885 Recurrent DNA copy number variation in the laboratory mouse
Data table header descriptions ID PROBE CLASS SEQUENCE ROW COL TILE_ID id of the tile
CHROMOSOME chromosome
CHR_START start
CHR_END end
GB_RANGE NCBI mouse build 36 ACCESSION VERSION[start..end]
Data table ID PROBE CLASS SEQUENCE ROW COL TILE_ID CHROMOSOME CHR_START CHR_END GB_RANGE CHR01P005501172
experimental
TTGATACTACTTCGAGATGAACCAGATATGTGATGATTACTATATATTCACATTTTTCCTAATGC
542
638
chr1:5501165-5604538
chr1
5501172
5501222
NC_000067.4[5501172..5501222]
CHR01P005501227
experimental
TTCCTAATGCTTACTTTGAACCAGAATGTGGAGATCTGCTTTGTCCTGATGTTTCCTA
327
241
chr1:5501165-5604538
chr1
5501227
5501277
NC_000067.4[5501227..5501277]
CHR01P005501267
experimental
TTGTCCTGATGTTTCCTAGGAGTCCAGATTACTTGACTCTGCTAGTCTTCT
88
708
chr1:5501165-5604538
chr1
5501267
5501317
NC_000067.4[5501267..5501317]
CHR01P005501302
experimental
ACTCTGCTAGTCTTCTGGTGGAGTCCCTATCCTCTTCAAGTTTCTCAATC
95
823
chr1:5501165-5604538
chr1
5501302
5501352
NC_000067.4[5501302..5501352]
CHR01P005501357
experimental
CCCAACTCTTTCACAAGACTCTCCAAAATCCATCTAGTATTTGGTTGTGGGT
525
495
chr1:5501165-5604538
chr1
5501357
5501407
NC_000067.4[5501357..5501407]
CHR01P005501417
experimental
CTGTTTCCATTGGTAGCTGGGGAGAGACTTTCAGAGGACAGTTCCTGTCT
112
832
chr1:5501165-5604538
chr1
5501417
5501467
NC_000067.4[5501417..5501467]
CHR01P005501519
experimental
GGTGGGTCTGGGTCTCAATTTGGGTCAGTCATTGGTTGACCATTCCTTCC
461
205
chr1:5501165-5604538
chr1
5501519
5501569
NC_000067.4[5501519..5501569]
CHR01P005501559
experimental
CATTCCTTCCATCTCTACTCTGTCCTTGTCCTTGCTCATCTTGTAGGCAG
166
616
chr1:5501165-5604538
chr1
5501559
5501609
NC_000067.4[5501559..5501609]
CHR01P005501607
experimental
AGGACACATTCTGATTCAAAACTTTTCTGTGTGACTTGGTGTCCTTATACCTCCACT
765
127
chr1:5501165-5604538
chr1
5501607
5501657
NC_000067.4[5501607..5501657]
CHR01P005501617
experimental
CTGATTCAAAACTTTTCTGTGTGACTTGGTGTCCTTATACCTCCACTGGGA
420
310
chr1:5501165-5604538
chr1
5501617
5501667
NC_000067.4[5501617..5501667]
CHR01P005501662
experimental
CTGGGAGTCCTGCCTCATTAAAGTAAGTGACAACTACAGGATCTGTATCT
610
56
chr1:5501165-5604538
chr1
5501662
5501712
NC_000067.4[5501662..5501712]
CHR01P005501707
experimental
TATCTGCCCATTGCTAAGAGTTTCATCCAGAGTCACCCTTATAGACACCC
735
587
chr1:5501165-5604538
chr1
5501707
5501757
NC_000067.4[5501707..5501757]
CHR01P005501772
experimental
TCATCAAATCTCTGTTCTCTCTCCCCTACTCTCCCAATACCTGACCCTCT
206
666
chr1:5501165-5604538
chr1
5501772
5501822
NC_000067.4[5501772..5501822]
CHR01P005501832
experimental
CTTCCCCACCCTCTCTCACACCCACTTCCATCCCTCCATCCACTGCTTAT
165
831
chr1:5501165-5604538
chr1
5501832
5501882
NC_000067.4[5501832..5501882]
CHR01P005501842
experimental
CTCTCTCACACCCACTTCCATCCCTCCATCCACTGCTTATATCTATTTTATTT
257
775
chr1:5501165-5604538
chr1
5501842
5501892
NC_000067.4[5501842..5501892]
CHR01P005501902
experimental
TGAGAAAGATTAAACCATCCTCCCTTGAACCCTCTCTGTTATTTGACTTCTTTGG
686
174
chr1:5501165-5604538
chr1
5501902
5501952
NC_000067.4[5501902..5501952]
CHR01P005501932
experimental
CCTCTCTGTTATTTGACTTCTTTGGGTATGTGGATTGTAGGCTTGTTATCTTGTACT
56
738
chr1:5501165-5604538
chr1
5501932
5501982
NC_000067.4[5501932..5501982]
CHR01P005502047
experimental
GTCACTCAGGATATTTCTAGCCCCATCCATTTGCCCACAAAACTCATGAT
291
793
chr1:5501165-5604538
chr1
5502047
5502097
NC_000067.4[5502047..5502097]
CHR01P005502237
experimental
TGTCCTTGTGGTACAGTGGAACTTCTTTGAGGAATGTGCCCAGAAGTGGT
345
53
chr1:5501165-5604538
chr1
5502237
5502287
NC_000067.4[5502237..5502287]
CHR01P005502252
experimental
GTGGAACTTCTTTGAGGAATGTGCCCAGAAGTGGTATAGCTGTGTTTTGA
207
923
chr1:5501165-5604538
chr1
5502252
5502302
NC_000067.4[5502252..5502302]
385213 64633 Kbytes .Supplementary data files not provided
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