NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Platform GPL4619 Query DataSets for GPL4619
Status Public on Jan 19, 2007
Title NimbleGen_DesignID3427_UNC_LiebLab tiling array
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Caenorhabditis elegans
Manufacturer NimbleGen Inc.
Manufacture protocol see NimbleGen website
 
 
Contributor(s) Ercan S, Giresi PG, Whittle CM, Zhang X, Green RD, Lieb JD
Submission date Dec 01, 2006
Last update date Jan 19, 2007
Contact name Jason D Lieb
E-mail(s) [email protected]
Phone 919-843-3228
Organization name University of North Carolina at Chapel Hill
Department Biology
Lab Jason Lieb
Street address 408 Fordham Hall, CB# 3280
City Chapel Hill
State/province NC
ZIP/Postal code 27599-3280
Country USA
 
Samples (15) GSM147974, GSM147975, GSM147977, GSM147978, GSM147979, GSM147980 
Series (3)
GSE6739 ChIP-chip analysis of Dosage Compensation complex members SDC-3 and DPY-27 in C elegans wild type embryos.
GSE10201 ChIP-chip analysis of HTZ-1 and RNA Polymerase II in wildtype (N2) embryos
GSE26186 Broad chromosomal domains of histone modification patterns in C. elegans

Data table header descriptions
ID
CHROMOSOME Chromosome
START Start coordinate from genome build WS120 strand is always positive
SEQUENCE Sequence of the probe

Data table
ID CHROMOSOME START SEQUENCE
CHRIVP6157385 chrIV 6157385 ATTAAAAAAGATAGATCAACAAGAGAATGTAAATAATTAAAAAATGAACT
CHRIVP6157471 chrIV 6157471 TTGTCGTTTCACATGGCATAAGTGGTCGAGGGCTTCCATGTGTCGGTGGT
CHRIVP6157557 chrIV 6157557 AAACCATTTCAAGAAAATGAAAGTGAAAGAATTACCAATGGTGAATGCTC
CHRIVP6157643 chrIV 6157643 TGGAGAATCTTCTCCACGTTCTTCTACGTCAGGTAGATCATAGACGTTTA
CHRIVP6157729 chrIV 6157729 CAACATTTTACATTTTACTTTAAGCTGCAAAACACACAGACTAGATATTA
CHRIVP6157815 chrIV 6157815 CACATGAAAATTCTTTGGCTGTCCGGAACCCTTTCGGATTTCAGAATTAG
CHRIVP6157901 chrIV 6157901 GCGACTGCAATGGAAATAAGAAAAAGCGGTAGGCAAAAATGGGTGGAGGC
CHRIVP6157987 chrIV 6157987 TTTGAAATAAAAATATTACTCTTTCAATTATTAAACAAGATGGAATTTTG
CHRIVP6158073 chrIV 6158073 CTACAACTTTATCAAAAGTAAGATATAACCATATATAGATTTATTAGTAA
CHRIVP6158159 chrIV 6158159 TTAAGTGTCTAGTTAGGGTTAGTTAGTTTGGGGGTTATTCAGATGGGATA
CHRIVP6158245 chrIV 6158245 TGAATCACTACAAACTACAAACTACACTCATCATTTAAAAAGTATACTTA
CHRIVP6158331 chrIV 6158331 TCGAGCTACCAACCATGAACTTTCGAGCAGCTTCTTGAAAGAGACCAGTT
CHRIVP6158417 chrIV 6158417 GCTTATAATCTTTGACTCTCAAATATTAGTTCAAAAACTAACCGAAAGAA
CHRIVP6158503 chrIV 6158503 CCTTCTTCCTTATTGGAGGTGGAGTTTCTTCTTCACTACTCTCCGTCTCT
CHRIVP6158589 chrIV 6158589 CGAAGTCTTTGTGCAACAGTTTCCTCATGTGAAATTGAAGAATGTCCTGA
CHRIVP6158675 chrIV 6158675 TACTCCTTCTGCATCTTTTTGACTTGGATTTCTCATTTTACGAAGACATC
CHRIVP6158761 chrIV 6158761 CTTCTTCAATTATAAACTCGAGTTCTTCTCTTTGTAACAATTCTTCAAGT
CHRIVP6158847 chrIV 6158847 AGCATACTGGAAAAAGTAAAATAACACTGTTTCAAACATCTCTTAAAGTC
CHRIVP6158933 chrIV 6158933 TCATTTCAAATATCCTTTATTTTATAAAAAAAAAACAACAAGTTCTATCG
CHRIVP6159019 chrIV 6159019 GAAATATCTGTTTTTTCCGCAATTTACAGAAATGTACGAGGTTTAAAAAA

Total number of rows: 577211

Table truncated, full table size 44197 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary data files not provided
| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap