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Platform GPL30511 Query DataSets for GPL30511
Status Public on Dec 22, 2021
Title NanoString Prognostic Liver Signature (PLS) plus ELS panel (186-gene PLS + 10-gene extension)
Technology type other
Distribution custom-commercial
Organism Homo sapiens
Manufacturer NanoString
Manufacture protocol See manufacturer's website.
 
 
Submission date Aug 13, 2021
Last update date Aug 13, 2021
Contact name Yujin Hoshida
Organization name University of Texas Southwestern Medical Center
Street address 5323 Harry Hines Blvd
City Dallas
State/province TX
ZIP/Postal code 75390
Country USA
 
Samples (156) GSM5517043, GSM5517044, GSM5517045, GSM5517046, GSM5517047, GSM5517048 
Series (2)
GSE85550 Molecular signature predictive of long-term liver fibrosis progression to inform anti-fibrotic drug development
GSE182060 Prognostic liver signature profiles in biopsy tissues from non-alcoholic fatty liver disease patients followed for fibrosis progression

Data table header descriptions
ID
Symbol Gene symbol
Probe.group Probe group
Probe.category Probe category
ELS.gene ELS gene
ENTREZ_GENE_ID Entrez Gene ID
Alias Alias
GB_ACC RefSeq accession.version

Data table
ID Symbol Probe.group Probe.category ELS.gene ENTREZ_GENE_ID Alias GB_ACC
FSHB FSHB signature Poor_prognosis_gene no 2488 FSHB NM_000510.2
SH3GL2 SH3GL2 signature Poor_prognosis_gene no 6456 SH3GL2 NM_003026.2
RBM34 RBM34 signature Poor_prognosis_gene no 23029 RBM34 NM_015014.2
NCAPH NCAPH signature Poor_prognosis_gene no 23397 NCAPH NM_015341.3
EGF EGF signature Poor_prognosis_gene no 1950 EGF NM_001963.4
TRIO TRIO signature Poor_prognosis_gene no 7204 TRIO NM_007118.2
COL6A3 COL6A3 signature Poor_prognosis_gene no 1293 COL6A3 NM_057167.3
ABLIM1 ABLIM1 signature Poor_prognosis_gene no 3983 ABLIM1 NM_002313.5
ITGA9 ITGA9 signature Poor_prognosis_gene no 3680 ITGA9 NM_002207.2
NTS NTS signature Poor_prognosis_gene no 4922 NTS NM_006183.4
SERPINB2 SERPINB2 signature Poor_prognosis_gene no 5055 SERPINB2 NM_002575.2
MMP7 MMP7 signature Poor_prognosis_gene no 4316 MMP7 NM_002423.3
PRKG2 PRKG2 signature Poor_prognosis_gene no 5593 PRKG2 NM_006259.1
EDG4 EDG4 signature Poor_prognosis_gene no 9170 LPAR2 NM_004720.5
NOS2A NOS2A signature Poor_prognosis_gene no 4843 NOS2A NM_000625.4
EPHA4 EPHA4 signature Poor_prognosis_gene no 2043 EPHA4 NM_004438.3
SP100 SP100 signature Poor_prognosis_gene no 6672 SP100 NM_003113.3
FMO1 FMO1 signature Poor_prognosis_gene no 2326 FMO1 NM_002021.1
GPX2 GPX2 signature Poor_prognosis_gene no 2877 GPX2 NM_002083.2
ATP4B ATP4B signature Poor_prognosis_gene no 496 ATP4B NM_000705.3

Total number of rows: 202

Table truncated, full table size 13 Kbytes.




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