NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Platform GPL22819 Query DataSets for GPL22819
Status Public on Dec 19, 2016
Title Illumina Human PsychArray-24 v1.1
Technology type oligonucleotide beads
Distribution commercial
Organism Homo sapiens
Manufacturer Illumina, Inc.
Manufacture protocol See manufacturer's website
support.illumina.com/array/array_kits/infinium-psycharray-beadchip-kit.html
 
 
Submission date Dec 19, 2016
Last update date May 25, 2018
Contact name GEO admin
E-mail(s) [email protected]
Organization name NCBI/NLM/NIH
Street address 9000 Rockville Pike
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
 
Samples (549) GSM2451742, GSM2451743, GSM2451744, GSM2451745, GSM2451746, GSM2451747 
Series (5)
GSE93353 In vitro fertilization does not increase the incidence of de novo copy number alterations in fetal and placental lineages
GSE96789 Comprehensive performance comparison of high-resolution array platforms for genome-wide Copy Number Variation (CNV) analysis in humans [IlluminaPsychArray]
GSE96909 Comprehensive performance comparison of high-resolution array platforms for genome-wide Copy Number Variation (CNV) analysis in humans

Data table header descriptions
ID Name
Chr
Position MapInfo
Alleles
Transcript(s)
Gene(s)
In-exon
Mutation(s)
SPOT_ID

Data table
ID Chr Position Alleles Transcript(s) Gene(s) In-exon Mutation(s) SPOT_ID
rs3094315 1 752566 [A/G] rs3094315
rs3131972 1 752721 [A/G] rs3131972
exm2268640 1 762320 [T/C] NR_024321 LINC00115 EXON Silent exm2268640
rs11240777 1 798959 [A/G] rs11240777
rs4970383 1 838555 [A/C] rs4970383
rs4475691 1 846808 [T/C] rs4475691
psy_rs1806509 1 853954 [A/C] NR_026874 LOC100130417 Silent psy_rs1806509
exm41 1 861349 [T/C] NM_152486 SAMD11 EXON Missense_P10S exm41
rs13302982 1 861808 [A/G] NM_152486 SAMD11 Silent rs13302982
exm1916089 1 865545 [A/G] NM_152486 SAMD11 EXON Missense_R28Q exm1916089
exm44 1 865584 [A/G] NM_152486 SAMD11 EXON Missense_R41Q exm44
exm46 1 865625 [A/G] NM_152486 SAMD11 EXON Missense_D55N exm46
exm47 1 865628 [A/G] NM_152486 SAMD11 EXON Missense_G56S exm47
exm51 1 865662 [A/G] NM_152486 SAMD11 EXON Missense_R67Q exm51
exm53 1 865665 [A/G] NM_152486 SAMD11 EXON Missense_R68Q exm53
exm55 1 865694 [T/C] NM_152486 SAMD11 EXON Missense_H78Y exm55
exm56 1 865700 [T/C] NM_152486 SAMD11 EXON Missense_R80C exm56
exm60 1 866429 [T/C] NM_152486 SAMD11 EXON Missense_H89Y exm60
exm63 1 866438 [A/G] NM_152486 SAMD11 EXON Missense_V92M exm63
exm67 1 871159 [A/G] NM_152486 SAMD11 EXON Missense_G105S exm67

Total number of rows: 571054

Table truncated, full table size 46744 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary file Size Download File type/resource
GPL22819_PsychArray_A_annotated.txt.gz 7.5 Mb (ftp)(http) TXT

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap