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Platform GPL21406 Query DataSets for GPL21406
Status Public on Feb 05, 2016
Title DNA Damage Signaling Pathway PCR Array Human PAHS-029Z
Technology type RT-PCR
Distribution virtual
Organism Homo sapiens
Manufacturer SABioscience (QIAGEN)
Manufacture protocol http://www.sabiosciences.com/rt_pcr_product/HTML/PAHS-029Z.html
Catalog number PAHS-029Z
 
Description DNA Damage Signaling Pathway PCR Array
The Human DNA Damage Signaling RT² Profiler™ PCR Array profiles the expression of 84 genes involved in DNA damage signaling pathways. The genes featured are those associated with the ATR/ATM signaling network and transcriptional targets of DNA damage response. DNA damage can result in cell cycle arrest, apoptosis, and the stabilization and repair of the cellular genome. Using real-time PCR, you can easily and reliably analyze expression of a focused panel of genes related to DNA Damage Signaling with this array.
 
Submission date Feb 03, 2016
Last update date Feb 05, 2016
Contact name Steven Grant
E-mail(s) [email protected]
Organization name VCU
Street address 401 College Street
City Richmond
ZIP/Postal code 23298
Country USA
 
Samples (4) GSM2054480, GSM2054481, GSM2054482, GSM2054483
Series (1)
GSE77560 DNA damage Signaling Pathway PCR Array to profile the expression of human genes regulating in the DNA damage response (DDR) network

Data table header descriptions
ID
Unigene UniGene cluster ID
GB_ORF
ORF
Description Gene description
Gene Name Gene name
SPOT_ID

Data table
ID Unigene GB_ORF ORF Description Gene Name SPOT_ID
A01 Hs.431048 NM_005157 ABL1 C-abl oncogene 1, non-receptor tyrosine kinase ABL, JTK7, bcr, abl, c-ABL, c-ABL1, p150, v-abl
A02 Hs.73722 NM_080649 APEX1 APEX nuclease (multifunctional DNA repair enzyme) 1 APE, APE1, APEN, APEX, APX, HAP1, REF1
A03 Hs.367437 NM_000051 ATM Ataxia telangiectasia mutated AT1, ATA, ATC, ATD, ATDC, ATE, TEL1, TELO1
A04 Hs.271791 NM_001184 ATR Ataxia telangiectasia and Rad3 related FCTCS, FRP1, MEC1, SCKL, SCKL1
A05 Hs.694840 NM_032166 ATRIP ATR interacting protein -
A06 Hs.533526 NM_000489 ATRX Alpha thalassemia/mental retardation syndrome X-linked ATR2, JMS, MRX52, MRXHF1, RAD54, RAD54L, SFM1, SHS, XH2, XNP, ZNF-HX
A07 Hs.591642 NM_000465 BARD1 BRCA1 associated RING domain 1 -
A08 Hs.624291 NM_004324 BAX BCL2-associated X protein BCL2L4
A09 Hs.467020 NM_014417 BBC3 BCL2 binding component 3 JFY-1, JFY1, PUMA
A10 Hs.725208 NM_000057 BLM Bloom syndrome, RecQ helicase-like BS, RECQ2, RECQL2, RECQL3
A11 Hs.194143 NM_007294 BRCA1 Breast cancer 1, early onset BRCAI, BRCC1, BROVCA1, FANCS, IRIS, PNCA4, PPP1R53, PSCP, RNF53
A12 Hs.128903 NM_032043 BRIP1 BRCA1 interacting protein C-terminal helicase 1 BACH1, FANCJ, OF
B01 Hs.437705 NM_001789 CDC25A Cell division cycle 25 homolog A (S. pombe) CDC25A2
B02 Hs.656 NM_001790 CDC25C Cell division cycle 25 homolog C (S. pombe) CDC25, PPP1R60
B03 Hs.184298 NM_001799 CDK7 Cyclin-dependent kinase 7 CAK1, CDKN7, HCAK, MO15, STK1, p39MO15
B04 Hs.370771 NM_000389 CDKN1A Cyclin-dependent kinase inhibitor 1A (p21, Cip1) CAP20, CDKN1, CIP1, MDA-6, P21, SDI1, WAF1, p21CIP1
B05 Hs.24529 NM_001274 CHEK1 CHK1 checkpoint homolog (S. pombe) CHK1
B06 Hs.291363 NM_007194 CHEK2 CHK2 checkpoint homolog (S. pombe) CDS1, CHK2, HuCds1, LFS2, PP1425, RAD53, hCds1
B07 Hs.715556 NM_006384 CIB1 Calcium and integrin binding 1 (calmyrin) CIB, CIBP, KIP1, PRKDCIP, SIP2-28
B08 Hs.151573 NM_004075 CRY1 Cryptochrome 1 (photolyase-like) PHLL1

Total number of rows: 96

Table truncated, full table size 8 Kbytes.




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Supplementary data files not provided
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