 |
 |
GEO help: Mouse over screen elements for information. |
|
| Status |
Public on Apr 30, 2016 |
| Title |
Agilent-039494 8x60k Human Whole Genome Microarray Gene expression (Probe name version) |
| Technology type |
in situ oligonucleotide |
| Distribution |
custom-commercial |
| Organism |
Homo sapiens |
| Manufacturer |
Agilent Technologies |
| Manufacture protocol |
www.chem.agilent.com
|
| |
|
| Description |
Agilent-039494 8x60k Human Whole Genome Microarray Gene expression (AMADID: 039494)
|
| |
|
| Submission date |
Oct 23, 2015 |
| Last update date |
Oct 23, 2015 |
| Contact name |
Genotypic technology |
| E-mail(s) |
[email protected]
|
| Organization name |
Genotypic Technology
|
| Street address |
259, Apoorva 4th cross,80 feet Road,RMV 2ND STAGE
|
| City |
Bangalore |
| State/province |
Karnataka |
| ZIP/Postal code |
560094 |
| Country |
India |
| |
|
| Samples (288)
|
GSM1916654, GSM1916655, GSM1916656, GSM1916657, GSM1916658, GSM1916659
GSM1916660, GSM1916661, GSM1981387, GSM1981388, GSM1981389, GSM1981390, GSM2247478, GSM2247479, GSM2247480, GSM2247481, GSM2296999, GSM2297000, GSM2297001, GSM2297002, GSM2297003, GSM2297004, GSM2297005, GSM2297006, GSM2341107, GSM2341108, GSM2341109, GSM2341110, GSM2341111, GSM2341112, GSM2341113, GSM2341114, GSM2341115, GSM2341116, GSM2341117, GSM2341118, GSM2671566, GSM2671567, GSM2671568, GSM2671569, GSM2671570, GSM2671571, GSM2671572, GSM2671573, GSM2671574, GSM2867549, GSM2867550, GSM2867551, GSM2913754, GSM2913755, GSM2913756, GSM2913757, GSM2913758, GSM2913759, GSM2913760, GSM2913761, GSM3141705, GSM3141706, GSM3141707, GSM3141708, GSM3141709, GSM3141710, GSM3561099, GSM3561100, GSM3609600, GSM3609601, GSM3609602, GSM3609603, GSM3609604, GSM3609605, GSM3609606, GSM3609607, GSM4451634, GSM4451635, GSM4451636, GSM4451637, GSM4451638, GSM4451639, GSM4451640, GSM4451641, GSM4451642, GSM4451643, GSM4451644, GSM4451645, GSM4451646, GSM4451647, GSM4451648, GSM4451649, GSM4451650, GSM4451651, GSM4451652, GSM4451653, GSM4451654, GSM4451655, GSM4451656, GSM4451657, GSM4451658, GSM4451659, GSM4451660, GSM4451661, GSM4451662, GSM4451663, GSM4451664, GSM4451665, GSM4451666, GSM4451667, GSM4451668, GSM4451669, GSM4451670, GSM4451671, GSM4451672, GSM4451673, GSM4451674, GSM4451675, GSM4451676, GSM4451677, GSM4451678, GSM4451679, GSM4451680, GSM4451681, GSM4451682, GSM4451683, GSM4451684, GSM4451685, GSM4451686, GSM4451687, GSM4451688, GSM4451689, GSM4451690, GSM4451691, GSM4451692, GSM4451693, GSM4451694, GSM4451695, GSM4451696, GSM4451697, GSM4451698, GSM4451699, GSM4451700, GSM4451701, GSM4451702, GSM4451703, GSM4451704, GSM4451705, GSM4451706, GSM4451707, GSM4451708, GSM4451709, GSM4451710, GSM4451711, GSM4451712, GSM4451713, GSM4451714, GSM4451715, GSM4451716, GSM4451717, GSM4451718, GSM4451719, GSM4451720, GSM4451721, GSM4451722, GSM4451723, GSM4451724, GSM4451725, GSM4451726, GSM4451727, GSM4451728, GSM4451729, GSM4451730, GSM4451731, GSM4451732, GSM4451733, GSM4451734, GSM4451735, GSM4451736, GSM4451737, GSM4451738, GSM4451739, GSM4451740, GSM4451741, GSM4451742, GSM4451743, GSM4451744, GSM4451745, GSM4451746, GSM4451747, GSM4451748, GSM4451749, GSM4451750, GSM4451751, GSM4451752, GSM4451753, GSM4451754, GSM4451755, GSM4451756, GSM4451757, GSM4451758, GSM4451759, GSM4451760, GSM4451761, GSM4451762, GSM4451763, GSM4451764, GSM4451765, GSM4451766, GSM4451767, GSM4451768, GSM4451769, GSM4451770, GSM4451771, GSM4451772, GSM4451773, GSM4451774, GSM4451775, GSM4451776, GSM4451777, GSM4451778, GSM4451779, GSM4451780, GSM4451781, GSM4451782, GSM4451783, GSM4451784, GSM4451785, GSM4451786, GSM4451787, GSM4451788, GSM4451789, GSM4451790, GSM4451791, GSM4451792, GSM4451793, GSM4451794, GSM4451795, GSM4451796, GSM4451797, GSM4451798, GSM4451799, GSM4451800, GSM4451801, GSM4451802, GSM4451803, GSM4451804, GSM4451805, GSM4451806, GSM4451807, GSM4451808, GSM4451809, GSM4451810, GSM4451811, GSM4451812, GSM4451813, GSM4451814, GSM4451815, GSM4451816, GSM4451817, GSM4451818, GSM4451819, GSM4451820, GSM4451821, GSM4451822, GSM4451823, GSM4451824, GSM4451825, GSM4451826, GSM4451827, GSM4451828, GSM4451829, GSM4451830, GSM4451831, GSM4451832, GSM4451833, GSM4451834, GSM4451835, GSM4451836, GSM4451837, GSM4451838, GSM4451839, GSM4451840, GSM4451841, GSM4451842, GSM4451843, GSM4451844, GSM4451845, GSM4451846, GSM4451847, GSM4451848, GSM4451849
|
| Series (13)
|
| GSE74305 |
Gene Expression Profile In Presence of p53 alone, p47 alone, or both |
| GSE76333 |
Profile of gene expression with HCV infection in Huh7.5 cells |
| GSE84673 |
Gene expression analysis of patient (HN137) primary and metastatic tumor derived cell lines |
| GSE84676 |
Phenotype-driven precision oncology in patient-derived tumor models predict therapeutic response in squamous cell carcinoma |
| GSE86176 |
Expression of genes in THP-1 macrophages in response to C. glabrata wt, Cgvps34Δ and Cgyps(1-11)Δ cells. |
| GSE87804 |
The gene expression signatures for Huh7 cell lines with HCC-associated HBV variants in small S proteins transfection |
| GSE100123 |
Phenotype-driven precision oncology in patient-derived tumor models predict therapeutic response in squamous cell carcinoma [expression] |
| GSE107450 |
Understanding gene expression signatures with pigmentation changes in Melanocytes |
| GSE108817 |
Effect of matrix deprivation on breast cancer cells Part-1 |
| GSE114437 |
Microarray based gene expression profiling of RNA binding protein, RBM10 in HEK 293 cells |
| GSE125009 |
Global gene expression profile in epithelium of control and haze predisposed subjects |
| GSE126605 |
Gene expression of mesothelioma cell line ACC-Meso-4 treated with shRNA targeting chromobox (CBX) 6, 7, and 8. |
| GSE147996 |
Replacement of nitrite in meat products by natural bioactive compounds results in reduced exposure to N-nitroso compounds: the PHYTOME project |
|
| Data table header descriptions |
| ID |
Probe ID of oligonucleotide |
| GeneName |
Gene |
| GenBank ID |
GenBank ID |
| Description |
Gene Description |
| SEQUENCE |
Oligonucleotide Probe sequence |
| ORF |
ORF Name |
| GB_ACC |
GenBank Accession number |
| SPOT_ID |
|
| Data table |
| ID |
GeneName |
GenBank ID |
Description |
SEQUENCE |
ORF |
GB_ACC |
SPOT_ID |
| A_23_P117082 |
HEBP1 |
NM_015987 |
ref|Homo sapiens heme binding protein 1 (HEBP1), mRNA [NM_015987] |
AAGGGGGAAAATGTGATTTGTGCCTGATCTTTCATCTGTGATTCTTATAAGAGCTTTGTC |
HEBP1 |
NM_015987 |
|
| A_33_P3246448 |
KCNE4 |
NM_080671 |
ref|Homo sapiens potassium voltage-gated channel, Isk-related family, member 4 (KCNE4), mRNA [NM_080671] |
GCAAGTCTCTCTGCACCTATTAAAAAGTGATGTATATACTTCCTTCTTATTCTGTTGAGT |
KCNE4 |
NM_080671 |
|
| A_33_P3318220 |
BPIFA3 |
NM_178466 |
ref|Homo sapiens BPI fold containing family A, member 3 (BPIFA3), transcript variant 1, mRNA [NM_178466] |
CATTCCATAAGGAGTGGTTCTCGGCAAATATCTCACTTGAATTTGACCTTGAATTGAGAC |
BPIFA3 |
NM_178466 |
|
| A_33_P3236322 |
LOC100129869 |
AK128005 |
gb|Homo sapiens cDNA FLJ46124 fis, clone TESTI2040372. [AK128005] |
ATTTATTTTCACAAGTGCATAGCGGCCAACACCACCAGCACTAACCAGAGTGGATTCTTG |
LOC100129869 |
AK128005 |
|
| A_33_P3319925 |
IRG1 |
ENST00000449753 |
ens|immunoresponsive 1 homolog (mouse) [Source:HGNC Symbol;Acc:33904] [ENST00000449753] |
AGAAGACCTAGAAGACTGTTCTGTGTTAACTACACTTCTCAAAGGACCCTCTCCACCAGA |
|
|
ENST00000449753 |
| A_21_P0000509 |
SNAR-G2 |
NR_024244 |
ref|Homo sapiens small ILF3/NF90-associated RNA G2 (SNAR-G2), small nuclear RNA [NR_024244] |
AGGGGAGGGTTCGAGGGTACGAGTTCGAGGCCAACCGGGTCCACATTGGTTGAGAAAAAA |
SNAR-G2 |
NR_024244 |
|
| A_21_P0000744 |
LOC100506844 |
NR_038269 |
ref|Homo sapiens uncharacterized LOC100506844 (LOC100506844), non-coding RNA [NR_038269] |
AGTCGTACCCTCTTGTTTTTCTCTGAGTCAGTCTTAAGGTGAAATGAAGTGTGGCCCAGT |
LOC100506844 |
NR_038269 |
|
| A_24_P215804 |
CKLF |
NM_016951 |
ref|Homo sapiens chemokine-like factor (CKLF), transcript variant 1, mRNA [NM_016951] |
AAAGAAGTTTTGTAATTTTATATTACTTTTTAGTTTGATACTAAGTATTAAACATATTTC |
CKLF |
NM_016951 |
|
| A_23_P110167 |
MGST2 |
NM_002413 |
ref|Homo sapiens microsomal glutathione S-transferase 2 (MGST2), transcript variant 1, mRNA [NM_002413] |
AATATCTGGACCTCAATATTGCCAAGAAACTGAGGCGGCAATTCTAACTTTTTCTCTTCC |
MGST2 |
NM_002413 |
|
| A_33_P3211513 |
CLK1 |
NM_001162407 |
ref|Homo sapiens CDC-like kinase 1 (CLK1), transcript variant 2, mRNA [NM_001162407] |
AAGTAGTTATAAAAGCAAACACAGGATTCACCACAGTACTTCACATCGTCGTTCACATGG |
CLK1 |
NM_001162407 |
|
| A_23_P103349 |
OCLM |
NM_022375 |
ref|Homo sapiens oculomedin (OCLM), mRNA [NM_022375] |
GTGTATATTATAGCTGCATTGCAGGTTTCAGGATTTGCAGGGTATGGGGATGTATCCACC |
OCLM |
NM_022375 |
|
| A_32_P61480 |
CASC2 |
NR_026941 |
ref|Homo sapiens cancer susceptibility candidate 2 (non-protein coding) (CASC2), transcript variant 3, non-coding RNA [NR_026941] |
TAATTACTTATATTGATGTTCTTCCTACGTCTAAGAAAAATGTTATTTCCATTCCCAAGA |
CASC2 |
NR_026941 |
|
| A_33_P3788124 |
PWRN1 |
NR_026646 |
ref|Homo sapiens Prader-Willi region non-protein coding RNA 1 (PWRN1), non-coding RNA [NR_026646] |
CTTTTGAGCCACTAAGCTACATGGTAATAGGCTATGCTTCAATAAACAATAATACACTTG |
PWRN1 |
NR_026646 |
|
| A_33_P3414202 |
MBNL3 |
NM_001170704 |
ref|Homo sapiens muscleblind-like 3 (Drosophila) (MBNL3), transcript variant 6, mRNA [NM_001170704] |
ATGATGCACGGTGCTACACCTACCACTGTGTCTGCAGCAACAACACCTGCCACCAGCGTT |
MBNL3 |
NM_001170704 |
|
| A_33_P3316686 |
CYB5R4 |
NM_016230 |
ref|Homo sapiens cytochrome b5 reductase 4 (CYB5R4), mRNA [NM_016230] |
GAATCCATGCTGAAAGAATGCCTGGTTGGCAGAATGGCCATTAAACCTGCTGTTCTGAAA |
CYB5R4 |
NM_016230 |
|
| A_33_P3300975 |
HOXC4 |
NM_014620 |
ref|Homo sapiens homeobox C4 (HOXC4), transcript variant 1, mRNA [NM_014620] |
TAGTGTCGATGTGAAATGCCCCGTGATCAATAATAAACCAGTGGATGTGAATTAGTTTTA |
HOXC4 |
NM_014620 |
|
| A_33_P3263061 |
AK3 |
NM_016282 |
ref|Homo sapiens adenylate kinase 3 (AK3), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA [NM_016282] |
TGCTGCCTGATGTCTCAATGGCTTCTGAATGACTGTTCTAATAAATGATCTTAAAACAGT |
AK3 |
NM_016282 |
|
| A_33_P3261373 |
ENST00000319813 |
ENST00000319813 |
ens|olfactory receptor, family 4, subfamily C, member 5 [Source:HGNC Symbol;Acc:14702] [ENST00000319813] |
GAAAAATGCCATGAAGCAGCTCTGGAGCCAAATAATCTGGGGTAACAATTTGTGTGATTA |
|
|
ENST00000319813 |
| A_24_P278460 |
FAR1 |
NM_032228 |
ref|Homo sapiens fatty acyl CoA reductase 1 (FAR1), mRNA [NM_032228] |
ACCCATGGAACAATATGCTTAGGATTACAGGAAGCAGTCCTTACTTACACTTCTTGTCTG |
FAR1 |
NM_032228 |
|
| A_21_P0013109 |
XLOC_l2_013153 |
TCONS_l2_00024969 |
linc|BROAD Institute lincRNA (XLOC_l2_013153), lincRNA [TCONS_l2_00024969] |
GTGAAAGTGTTCCTTCTGCAGAATGAGGCTCAAAAGAGGAACATGAATAATTTGATATTT |
|
|
TCONS_l2_00024969 |
Total number of rows: 50599
Table truncated, full table size 9764 Kbytes.
| Supplementary data files not provided |
|
|
|
|
 |
Less...
More...