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Status
Public on Jun 27, 2002
Title
SVA
Technology type
spotted DNA/cDNA
Distribution
non-commercial
Organism
Homo sapiens
Description
A microarray with 6720 spot features.
Submission date
May 22, 2002
Last update date
May 26, 2005
Organization
Stanford Microarray Database (SMD)
E-mail(s)
[email protected] Phone
650-498-6012
URL
http://genome-www5.stanford.edu/ Department
Stanford University, School of Medicine
Street address
300 Pasteur Drive
City
Stanford
State/province
CA
ZIP/Postal code
94305
Country
USA
Samples (12)
GSM1715 , GSM1716 , GSM1717 , GSM1718 , GSM1719 , GSM1720
Series (3)
GSE48 Secreted and membrane-associated genes
GSE49 DNA copy-number changes
GSE4175 Genome-Scale Identification of Membrane-Associated Human mRNAs
Data table header descriptions ID unique spot identifier
NAME name of spot
CLONE_ID cDNA clone identifier
GENE_SYM gene symbol
GENE_NAME gene name, description
UNIGENE NCBI UniGene cluster identifier
GB_ACC GenBank accession number
SPOT_ID PREFERRED_NAME preferred gene name
SECTOR spot sector grid coordinate
SECTORROW spot row grid coordinate
SECTORCOL spot column grid coordinate
SOURCE PLATE clone plate identifier
PROW clone plate row
PCOL clone plate column
FAILED IS_VERIFIED IS_CONTAMINATED
Data table ID NAME CLONE_ID GENE_SYM GENE_NAME UNIGENE GB_ACC SPOT_ID PREFERRED_NAME SECTOR SECTORROW SECTORCOL SOURCE PLATE PROW PCOL FAILED IS_VERIFIED IS_CONTAMINATED 1
TOTAL HUMAN
TOTAL HUMAN
1
1
1
jon pollack:384(1A1)
1
A
1
0
N
U
2
COT-1
COT-1
1
1
2
jon pollack:384(1A3)
1
A
3
0
N
U
3
HERING SPERM
HERING SPERM
1
1
3
jon pollack:384(1A5)
1
A
5
0
N
U
4
LAMBDA
LAMBDA
1
1
4
jon pollack:384(1A7)
1
A
7
0
N
U
5
BLUESCRIPT
BLUESCRIPT
1
1
5
jon pollack:384(1A9)
1
A
9
0
N
U
6
POLY (DA)
POLY (DA)
1
1
6
jon pollack:384(1A11)
1
A
11
0
N
U
7
E. COLI 10
E. COLI 10
1
1
7
jon pollack:384(1C1)
1
C
1
0
N
U
8
E. COLI 29
E. COLI 29
1
1
8
jon pollack:384(1C3)
1
C
3
0
N
U
9
E. COLI 33
E. COLI 33
1
1
9
jon pollack:384(1C5)
1
C
5
0
N
U
10
E. COLI 35
E. COLI 35
1
1
10
jon pollack:384(1C7)
1
C
7
0
N
U
11
E. COLI 36
E. COLI 36
1
1
11
jon pollack:384(1C9)
1
C
9
0
N
U
12
E. COLI 38
E. COLI 38
1
1
12
jon pollack:384(1C11)
1
C
11
0
N
U
13
2030
IMAGE:268412
MCF2
MCF.2 cell line derived transforming sequence
89543
N23406 DBL proto-oncogene
1
1
13
jon pollack:384(1E1)
1
E
1
0
N
U
14
23097
IMAGE:271478
MXI1
MAX-interacting protein 1
118630
N35022 Mad2=MXI-1=MAX-binding protein=antagonizer of myc transcript
1
1
14
jon pollack:384(1E3)
1
E
3
0
N
U
15
116628
IMAGE:417066
DXF68S1E
DNA segment, numerous copies, expressed probes (GS1 gene)
78991
W87377 1
1
15
jon pollack:384(1E5)
1
E
5
0
N
U
16
115646
IMAGE:360067
OAZ1
ornithine decarboxylase antizyme 1
125078
AA035802 1
1
16
jon pollack:384(1E7)
1
E
7
0
N
U
17
112971
IMAGE:209059
APXL
apical protein, Xenopus laevis-like
2391
H60731 1
1
17
jon pollack:384(1E9)
1
E
9
0
N
U
18
116734
IMAGE:418239
AKR1B1
aldo-keto reductase family 1, member B1 (aldose reductase)
75313
W90290 1
1
18
jon pollack:384(1E11)
1
E
11
0
N
U
19
118500
IMAGE:509944
VDAC1
voltage-dependent anion channel 1
149155
AA053367 1
1
19
jon pollack:384(1G1)
1
G
1
0
N
U
20
125624
IMAGE:564511
LDHA
lactate dehydrogenase A
2795
AA121562 1
1
20
jon pollack:384(1G3)
1
G
3
0
N
U
6720 804 Kbytes .Supplementary data files not provided
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