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| Status |
Public on Nov 19, 2004 |
| Title |
Spermophilus lateralis array Mk 1 |
| Technology type |
spotted DNA/cDNA |
| Distribution |
non-commercial |
| Organism |
Callospermophilus lateralis |
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| Description |
cDNA array for the Golden-mantled ground squirrel (Spermophilus lateralis)
Keywords = Spermophilus
Keywords = squirrel
Keywords = hibernation
Keywords = torpor
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| Contributor(s) |
Gracey AY |
| Submission date |
Nov 14, 2004 |
| Last update date |
May 26, 2005 |
| Contact name |
Andrew Gracey |
| E-mail(s) |
[email protected]
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| Phone |
831 655 6238
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| Organization name |
Stanford University
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| Street address |
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| City |
Pacific Grove |
| State/province |
CA |
| ZIP/Postal code |
93950 |
| Country |
USA |
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| Samples (115)
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GSM36492, GSM36493, GSM36494, GSM36495, GSM36496, GSM36497
GSM36498, GSM36499, GSM36500, GSM36501, GSM36502, GSM36503, GSM36504, GSM36505, GSM36506, GSM36507, GSM36508, GSM36509, GSM36510, GSM36511, GSM36512, GSM36513, GSM36514, GSM36515, GSM36516, GSM36517, GSM36518, GSM36519, GSM36520, GSM36521, GSM36522, GSM36523, GSM36524, GSM36525, GSM36526, GSM36527, GSM36528, GSM36529, GSM36530, GSM36531, GSM36532, GSM36533, GSM36534, GSM36535, GSM36536, GSM36537, GSM36538, GSM36539, GSM36540, GSM36541, GSM36542, GSM36543, GSM36544, GSM36545, GSM36546, GSM36547, GSM36548, GSM36549, GSM36550, GSM36551, GSM36552, GSM36553, GSM36554, GSM36555, GSM36556, GSM36557, GSM36558, GSM36559, GSM36560, GSM36561, GSM36562, GSM36563, GSM36564, GSM36565, GSM36566, GSM36567, GSM36568, GSM36569, GSM36570, GSM36571, GSM36572, GSM36573, GSM36574, GSM36575, GSM36576, GSM36577, GSM36578, GSM36579, GSM36580, GSM36581, GSM36582, GSM36583, GSM36584, GSM36585, GSM36586, GSM36587, GSM36588, GSM36589, GSM36590, GSM36591, GSM36592, GSM36593, GSM36594, GSM36595, GSM36596, GSM36597, GSM36598, GSM36599, GSM36600, GSM36601, GSM36602, GSM36733, GSM36734, GSM36735, GSM36736
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| Series (5)
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| GSE2021 |
13-lined ground squirrel (Spermophilus tridecemlineatus) hibernating liver transcriptome |
| GSE2022 |
Golden-mantled ground squirrel (Spermophilus lateralis) hibernating brain transcriptome |
| GSE2023 |
Golden-mantled ground squirrel (Spermophilus lateralis) hibernating heart transcriptome |
| GSE2024 |
Golden-mantled ground squirrel (Spermophilus lateralis) hibernating liver transcriptome |
| GSE2033 |
The hibernating phenotype assessed through transcript screening |
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| Data table header descriptions |
| ID |
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| Internal laboratory clone ID |
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| Sequence status |
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| GB_ACC |
GenBank Accession Number |
| SPOT_ID |
spot identifier |
| Gene_name |
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| EST_cluster_ID |
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| Number of contiged ESTs |
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| DB_BLAST |
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| E-value |
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| Identities |
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| DB_acc |
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| DB_id |
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| GO_cellular_component |
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| GO_molecular_function |
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| GO_biological_process |
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| EC_number |
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| cDNA library source tissue |
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| Data table |
| ID |
Internal laboratory clone ID |
Sequence status |
GB_ACC |
SPOT_ID |
Gene_name |
EST_cluster_ID |
Number of contiged ESTs |
DB_BLAST |
E-value |
Identities |
DB_acc |
DB_id |
GO_cellular_component |
GO_molecular_function |
GO_biological_process |
EC_number |
cDNA library source tissue |
| 01a01 |
01a01 |
Unsequenced cDNA clone |
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Unsequenced cDNA clone 01a01 |
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Liver |
| 01a02 |
01a02 |
Unsequenced cDNA clone |
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Unsequenced cDNA clone 01a02 |
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Liver |
| 01a03 |
01a03 |
Unsequenced cDNA clone |
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Unsequenced cDNA clone 01a03 |
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Liver |
| 01a04 |
01a04 |
Unsequenced cDNA clone |
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Unsequenced cDNA clone 01a04 |
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Liver |
| 01a05 |
01a05 |
Unsequenced cDNA clone |
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Unsequenced cDNA clone 01a05 |
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Liver |
| 01a06 |
01a06 |
Unsequenced cDNA clone |
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Unsequenced cDNA clone 01a06 |
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Liver |
| 01a07 |
01a07 |
Unsequenced cDNA clone |
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Unsequenced cDNA clone 01a07 |
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Liver |
| 01a08 |
01a08 |
Unsequenced cDNA clone |
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Unsequenced cDNA clone 01a08 |
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Liver |
| 01a09 |
01a09 |
Unsequenced cDNA clone |
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Unsequenced cDNA clone 01a09 |
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Liver |
| 01a10 |
01a10 |
Unsequenced cDNA clone |
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Unsequenced cDNA clone 01a10 |
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Liver |
| 01a11 |
01a11 |
5' sequenced cDNA clone |
CO732290 |
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Unclassifiable EST |
1282-1 |
1 |
utrdb |
N/A |
N/A |
No hits found |
N/A |
N/A |
N/A |
N/A |
N/A |
Liver |
| 01a12 |
01a12 |
Unsequenced cDNA clone |
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Unsequenced cDNA clone 01a12 |
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Liver |
| 01a13 |
01a13 |
5' sequenced cDNA clone |
CO732291 |
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Fatty acid-binding protein, liver (L-FABP) |
584-43 |
126 |
swissprot |
3e-22 |
87% |
P07148 |
FABL_HUMAN |
GO:0005737,cytoplasm; |
GO:0005215,transporter activity; GO:0005319,lipid transporter activity; GO:0005488,binding; GO:0008289,lipid binding; |
GO:0006631,fatty acid metabolism; GO:0006810,transport; GO:0007267,cell-cell signaling; GO:0009887,organogenesis; |
N/A |
Liver |
| 01a14 |
01a14 |
Unsequenced cDNA clone |
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Unsequenced cDNA clone 01a14 |
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Liver |
| 01a15 |
01a15 |
Unsequenced cDNA clone |
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Unsequenced cDNA clone 01a15 |
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Liver |
| 01a16 |
01a16 |
Unsequenced cDNA clone |
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Unsequenced cDNA clone 01a16 |
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Liver |
| 01a17 |
01a17 |
5' sequenced cDNA clone |
CO732292 |
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Unclassifiable EST |
22-1 |
15 |
utrdb |
N/A |
N/A |
No hits found |
N/A |
N/A |
N/A |
N/A |
N/A |
Liver |
| 01a18 |
01a18 |
5' sequenced cDNA clone |
CO732293 |
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Unclassifiable EST |
22-1 |
15 |
utrdb |
N/A |
N/A |
No hits found |
N/A |
N/A |
N/A |
N/A |
N/A |
Liver |
| 01a19 |
01a19 |
Unsequenced cDNA clone |
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Unsequenced cDNA clone 01a19 |
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Liver |
| 01a20 |
01a20 |
Unsequenced cDNA clone |
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Unsequenced cDNA clone 01a20 |
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Liver |
Total number of rows: 12576
Table truncated, full table size 2274 Kbytes.
| Supplementary data files not provided |
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