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Platform GPL14116 Query DataSets for GPL14116
Status Public on Aug 06, 2011
Title Febit_IMIKRO_Streptococcus_pyogenes_16K_v1
Technology type in situ oligonucleotide
Distribution non-commercial
Organism Streptococcus pyogenes NZ131
Manufacturer Febit biomed GmbH Company (Heidelberg, Germany)
Manufacture protocol in situ oligonucleotides, custom-made tiling array of the intergenic regions (50 nucleotides probes length with a 15 nucleotides overlap) for both strands. Synthesis performed by Geniom Microarray Facility (Febit biomed GmbH, Heidelberg, Germany)
 
 
Submission date Aug 05, 2011
Last update date Aug 06, 2011
Contact name Nadja Patenge
E-mail(s) [email protected]
Phone 493814945916
Fax 493814945902
Organization name University of Rostock
Department Institute of Medical Microbiology, Virology and Hygiene
Street address Schillingallee 70
City Rostock
ZIP/Postal code 18057
Country Germany
 
Samples (16) GSM774163, GSM774164, GSM774165, GSM774166, GSM774167, GSM774168 
Series (1)
GSE31228 Identification of small non coding RNAs in S. pyognes M49 using intergenic tiling arrays

Data table header descriptions
ID
SEQUENCE sequence of oligonucleotide probes
SPOT_ID

Data table
ID SEQUENCE SPOT_ID
cf_A1214102_A1214102_1_1213833_1213882_f AACCAAATAATCCCTGCCTAGATAACCTAGACAGGGACGAATTTCGTGTT --cf_A1214102_A1214102_1_1213833_1213882_f
cf_A1214102_A1214102_2_1213868_1213917_f GACGAATTTCGTGTTACGATTTCCGCGGTACCACCACTGTTTCAAACCAT --cf_A1214102_A1214102_2_1213868_1213917_f
cf_A1214102_A1214102_3_1213903_1213952_f ACTGTTTCAAACCATAAAATGGGTCTGCTACTTTTCATATCTGATTTCTG --cf_A1214102_A1214102_3_1213903_1213952_f
cf_A1214102_A1214102_4_1213938_1213987_f CATATCTGATTTCTGATCCTCAGCTACTAGCCTTGACATCCTGTGCGGAT --cf_A1214102_A1214102_4_1213938_1213987_f
cf_A1214102_A1214102_5_1213973_1214022_f ACATCCTGTGCGGATTTCTCAACACCACCGGCTCTCTGTAACAGACCAAC --cf_A1214102_A1214102_5_1213973_1214022_f
cf_A1214102_A1214102_6_1214008_1214057_f CTGTAACAGACCAACTCAATGCACCTCTAATTGCTAATATTCTAACAAAT --cf_A1214102_A1214102_6_1214008_1214057_f
cf_A1214102_A1214102_7_1214043_1214092_f AATATTCTAACAAATTTATCGCCTTTAAGCAACGAGAAGATGACTATTTT --cf_A1214102_A1214102_7_1214043_1214092_f
cf_A1214102_A1214102_8_1214053_1214102_f CAAATTTATCGCCTTTAAGCAACGAGAAGATGACTATTTTTTAAAGCTTG --cf_A1214102_A1214102_8_1214053_1214102_f
cf_A1698304_A1698304_1_1698123_1698172_f GAAGTCAAAAAATAAGGTCTCACACTTTGTGAGACCTTATCGGTATAGGA --cf_A1698304_A1698304_1_1698123_1698172_f
cf_A1698304_A1698304_2_1698158_1698207_f CTTATCGGTATAGGAGGGGTGAATAAGATGGGAATCGGGTTGAGATAGCG --cf_A1698304_A1698304_2_1698158_1698207_f
cf_A1698304_A1698304_3_1698193_1698242_f CGGGTTGAGATAGCGTTAGTTTAAGACGATACTTCTACAACCAAATACTT --cf_A1698304_A1698304_3_1698193_1698242_f
cf_A1698304_A1698304_4_1698228_1698277_f TACAACCAAATACTTATCCTATTAAGGAATGACATTAGTATACTAGATAA --cf_A1698304_A1698304_4_1698228_1698277_f
cf_A1698304_A1698304_5_1698255_1698304_f AATGACATTAGTATACTAGATAAGACTTAAAGAAACCTTAAGCCAAAAAA --cf_A1698304_A1698304_5_1698255_1698304_f
cf_A1733484_A1733484_1_1733303_1733352_f AGACAGAAAAAAGCCTTGCAAAATGCAAGGCTTGCTTTTCTTTTTCTTGA --cf_A1733484_A1733484_1_1733303_1733352_f
cf_A1733484_A1733484_2_1733338_1733387_f TTTTCTTTTTCTTGACTCTGAGTTTCCCCATTATCAACTGTGTTATTGTA --cf_A1733484_A1733484_2_1733338_1733387_f
cf_A1733484_A1733484_3_1733373_1733422_f AACTGTGTTATTGTAAGTGTGCACTTACTTGACCTGAGCTTCTGTTTTCT --cf_A1733484_A1733484_3_1733373_1733422_f
cf_A1733484_A1733484_4_1733408_1733457_f GAGCTTCTGTTTTCTCAAACAGACTTGATATTATATTATCATATTCGTGA --cf_A1733484_A1733484_4_1733408_1733457_f
cf_A1733484_A1733484_5_1733435_1733484_f ATATTATATTATCATATTCGTGAGATGAGCGCAAGTCTTTTTATAGAAAA --cf_A1733484_A1733484_5_1733435_1733484_f
cf_A199720_A199720_1_199489_199538_f TTTTTAAATTTAAAAACCTAACCAGCCGGTTAACTGGTCAGGTTTAAACC --cf_A199720_A199720_1_199489_199538_f
cf_A199720_A199720_2_199524_199573_f GGTCAGGTTTAAACCAGGGAGGGCACCCTACGAAAGATAGGGTGCCCAGG --cf_A199720_A199720_2_199524_199573_f

Total number of rows: 18006

Table truncated, full table size 2472 Kbytes.




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