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Platform GPL13175 Query DataSets for GPL13175
Status Public on Jul 25, 2011
Title [FDA_ECSGa520423F] Affymetrix Escherichia coli and Shigella 23K
Technology type in situ oligonucleotide
Distribution custom-commercial
Organisms Escherichia coli; Shigella
Manufacturer Affymetrix
Manufacture protocol see manufacturer's website
 
 
Submission date Feb 15, 2011
Last update date Aug 28, 2012
Contact name David A Rasko
E-mail(s) drasko@som.umaryland.edu
Phone 410 706 6774
Organization name University of Maryland School of Medicine
Department Istitute for Genome Sciences/Microbiology and Immunology
Street address 801 W. Baltimore Street, Room 619
City Baltimore
State/province MD
ZIP/Postal code 21201
Country USA
 
Samples (88) GSM675582, GSM675583, GSM675584, GSM675585, GSM675586, GSM675587 
Series (5)
GSE27326 Comparative Genomic Hybridization of E. coli and Shigella species to determine the relatedness of isolates from Neobladders
GSE31804 Expression data of enterotoxigenic (ETEC) isolate E24377A
GSE31806 E. coli strain E24377A

Data table header descriptions
ID
ORF_LIST
SPOT_ID

Data table
ID ORF_LIST SPOT_ID
A0001_at A0001
A0003_at A0003
A0004_at A0004
A0009_s_at A0009, APECO1_1068, c2444, D4534, EC536_1360, EC869_8848, F2257, G4380, H2034, J5170, L4766, M4534, N1481, UTI89_C2195
A0011_s_at A0011, b1983, D4535, H2035, J5171, SB5_4547, SS5_1813, SSO_2046, W1923
A0014_s_at A0014, b1987, EC536_5992, EC869_0192, ECs2783, F2259, L3182, SB5_4560, SS5_1811, SSO_2042, W1925, Z3146
A0015_s_at A0015, b1988, SS5_1816, SSO_2049, W1926
A0019_s_at A0019, APECO1_1074, b1993, c2479, EC536_0004, EC869_0185, ECP_1991, ECs2788, F2264, G0026, J1147, K5014, L3177, M1990, N1521, SD1_0819, SDM_2142, SDY_2240, SF2061, SFV_2065, SS5_1819, SSO_2054, UTI89_C2231, V0444, W1930, Z3153
A0020_s_at A0020, SS5_1820, SSO_2055
A0022_s_at A0022
A0023_s_at A0023
A0024_s_at A0024
A0025_s_at A0025, SS5_1825, SSO_2060
A0026_s_at A0026, SS5_1826, SSO_2061
A0027_s_at A0027, SS5_1827, SSO_2062
A0028_at A0028
A0029_at A0029
A0030_s_at A0030
A0031_s_at A0031, SS5_1831, SSO_2066
A0032_s_at A0032, SS5_1832, SSO_2067

Total number of rows: 23163

Table truncated, full table size 1705 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary file Size Download File type/resource
GPL13175_FDA_ECSGa520423F.cdf.gz 6.9 Mb (ftp)(http) CDF
GPL13175_FDA_ECSGa520423F_Annotation.txt.gz 2.7 Mb (ftp)(http) TXT
GPL13175_FDA_ECSGa520423F_ProbeSequences.txt.gz 4.3 Mb (ftp)(http) TXT

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