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GEO help: Mouse over screen elements for information. |
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Status |
Public on Jul 25, 2011 |
Title |
[FDA_ECSGa520423F] Affymetrix Escherichia coli and Shigella 23K |
Technology type |
in situ oligonucleotide |
Distribution |
custom-commercial |
Organisms |
Escherichia coli; Shigella |
Manufacturer |
Affymetrix |
Manufacture protocol |
see manufacturer's website
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Submission date |
Feb 15, 2011 |
Last update date |
Aug 28, 2012 |
Contact name |
David A Rasko |
E-mail(s) |
drasko@som.umaryland.edu
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Phone |
410 706 6774
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Organization name |
University of Maryland School of Medicine
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Department |
Istitute for Genome Sciences/Microbiology and Immunology
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Street address |
801 W. Baltimore Street, Room 619
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City |
Baltimore |
State/province |
MD |
ZIP/Postal code |
21201 |
Country |
USA |
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Samples (88)
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GSM675582, GSM675583, GSM675584, GSM675585, GSM675586, GSM675587
GSM675588, GSM675589, GSM675590, GSM675591, GSM675592, GSM675593, GSM675594, GSM675595, GSM675596, GSM675597, GSM675598, GSM675599, GSM675600, GSM675601, GSM675602, GSM675603, GSM675604, GSM675605, GSM675606, GSM675607, GSM675608, GSM675609, GSM675610, GSM675611, GSM789182, GSM789183, GSM789184, GSM789185, GSM789186, GSM789187, GSM789188, GSM789189, GSM789190, GSM789191, GSM789192, GSM789193, GSM789194, GSM789195, GSM789196, GSM789197, GSM789198, GSM789199, GSM789200, GSM789201, GSM789202, GSM789203, GSM789204, GSM993804, GSM993805, GSM993806, GSM993807, GSM993808, GSM993809, GSM993810, GSM993811, GSM993812, GSM993813, GSM993814, GSM993815, GSM993816, GSM993817, GSM993818, GSM993819, GSM993820, GSM993821, GSM993822, GSM993823, GSM993824, GSM1003269, GSM1003270, GSM1003271, GSM1003272, GSM1003273, GSM1003274, GSM1003275, GSM1003276, GSM1003277, GSM1003278, GSM1003279, GSM1003280, GSM1003281, GSM1003282
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Series (5)
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GSE27326 |
Comparative Genomic Hybridization of E. coli and Shigella species to determine the relatedness of isolates from Neobladders |
GSE31804 |
Expression data of enterotoxigenic (ETEC) isolate E24377A |
GSE31806 |
E. coli strain E24377A |
GSE40427 |
Identification of entertoxigenic Escherichia coli genes transcriptionally altered with the interaction of host cells |
GSE40851 |
Expression data from wild type and deltaS4473 Shigella flexneri 2457T |
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Data table header descriptions |
ID |
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ORF_LIST |
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SPOT_ID |
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Data table |
ID |
ORF_LIST |
SPOT_ID |
A0001_at |
A0001 |
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A0003_at |
A0003 |
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A0004_at |
A0004 |
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A0009_s_at |
A0009, APECO1_1068, c2444, D4534, EC536_1360, EC869_8848, F2257, G4380, H2034, J5170, L4766, M4534, N1481, UTI89_C2195 |
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A0011_s_at |
A0011, b1983, D4535, H2035, J5171, SB5_4547, SS5_1813, SSO_2046, W1923 |
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A0014_s_at |
A0014, b1987, EC536_5992, EC869_0192, ECs2783, F2259, L3182, SB5_4560, SS5_1811, SSO_2042, W1925, Z3146 |
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A0015_s_at |
A0015, b1988, SS5_1816, SSO_2049, W1926 |
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A0019_s_at |
A0019, APECO1_1074, b1993, c2479, EC536_0004, EC869_0185, ECP_1991, ECs2788, F2264, G0026, J1147, K5014, L3177, M1990, N1521, SD1_0819, SDM_2142, SDY_2240, SF2061, SFV_2065, SS5_1819, SSO_2054, UTI89_C2231, V0444, W1930, Z3153 |
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A0020_s_at |
A0020, SS5_1820, SSO_2055 |
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A0022_s_at |
A0022 |
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A0023_s_at |
A0023 |
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A0024_s_at |
A0024 |
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A0025_s_at |
A0025, SS5_1825, SSO_2060 |
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A0026_s_at |
A0026, SS5_1826, SSO_2061 |
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A0027_s_at |
A0027, SS5_1827, SSO_2062 |
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A0028_at |
A0028 |
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A0029_at |
A0029 |
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A0030_s_at |
A0030 |
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A0031_s_at |
A0031, SS5_1831, SSO_2066 |
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A0032_s_at |
A0032, SS5_1832, SSO_2067 |
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Total number of rows: 23163
Table truncated, full table size 1705 Kbytes.
Supplementary file |
Size |
Download |
File type/resource |
GPL13175_FDA_ECSGa520423F.cdf.gz |
6.9 Mb |
(ftp)(http) |
CDF |
GPL13175_FDA_ECSGa520423F_Annotation.txt.gz |
2.7 Mb |
(ftp)(http) |
TXT |
GPL13175_FDA_ECSGa520423F_ProbeSequences.txt.gz |
4.3 Mb |
(ftp)(http) |
TXT |
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