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Platform GPL11085 Query DataSets for GPL11085
Status Public on Nov 15, 2010
Title NimbleGen Streptococcus pyogenes NZ131 intergenic array
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Streptococcus pyogenes NZ131
Manufacturer NimbleGen
Manufacture protocol High-density DNA array prepared with Maskless Array Synthesizer (MAS) technology. See manufacturer's website at http://www.nimblegen.com/.
 
Description Expression array including select intergenic region tiles of S. pyogenes NZ131
 
Submission date Oct 21, 2010
Last update date May 21, 2012
Contact name Michael J Federle
E-mail(s) [email protected]
Organization name University of Illinois at Chicago
Department Microbiology & Imm. / Cntr Pharm Biotech
Street address 900 S Ashland Ave. MC870
City Chicago
State/province IL
ZIP/Postal code 60607
Country USA
 
Relations
Alternative to GPL15576

Data table header descriptions
ID
SEQ_ID ID_REF; these identify the Entrez locus number for NZ131 genes; also contains genome locations of intergenic region tiles
GENE_EXPR_OPTION indicates probe replicate number on array
PROBE_ID indicates probe location within gene or intergenic region
ORF ORF Name
FUNCTION gene function
RANGE_GB Genome GenBank Accession number
RANGE_START start position
RANGE_END end position
SPOT_ID spot identifier

Data table
ID SEQ_ID GENE_EXPR_OPTION PROBE_ID ORF FUNCTION RANGE_GB RANGE_START RANGE_END SPOT_ID
1 SPY_1000524_1001024:1-501 FWD_TILE1 SPY_1000524_1001024FS000000009 SPY_1000524_1001024:1-501
2 SPY_1000524_1001024:1-501 FWD_TILE1 SPY_1000524_1001024FS000000061 SPY_1000524_1001024:1-501
3 SPY_1000524_1001024:1-501 FWD_TILE1 SPY_1000524_1001024FS000000122 SPY_1000524_1001024:1-501
4 SPY_1000524_1001024:1-501 FWD_TILE1 SPY_1000524_1001024FS000000201 SPY_1000524_1001024:1-501
5 SPY_1000524_1001024:1-501 FWD_TILE1 SPY_1000524_1001024FS000000244 SPY_1000524_1001024:1-501
6 SPY_1000524_1001024:1-501 FWD_TILE1 SPY_1000524_1001024FS000000311 SPY_1000524_1001024:1-501
7 SPY_1000524_1001024:1-501 FWD_TILE1 SPY_1000524_1001024FS000000381 SPY_1000524_1001024:1-501
8 SPY_1000524_1001024:1-501 FWD_TILE1 SPY_1000524_1001024FS000000431 SPY_1000524_1001024:1-501
9 SPY_1000524_1001024:1-501 FWD_TILE2 SPY_1000524_1001024FS000000009 SPY_1000524_1001024:1-501
10 SPY_1000524_1001024:1-501 FWD_TILE2 SPY_1000524_1001024FS000000061 SPY_1000524_1001024:1-501
11 SPY_1000524_1001024:1-501 FWD_TILE2 SPY_1000524_1001024FS000000122 SPY_1000524_1001024:1-501
12 SPY_1000524_1001024:1-501 FWD_TILE2 SPY_1000524_1001024FS000000201 SPY_1000524_1001024:1-501
13 SPY_1000524_1001024:1-501 FWD_TILE2 SPY_1000524_1001024FS000000244 SPY_1000524_1001024:1-501
14 SPY_1000524_1001024:1-501 FWD_TILE2 SPY_1000524_1001024FS000000311 SPY_1000524_1001024:1-501
15 SPY_1000524_1001024:1-501 FWD_TILE2 SPY_1000524_1001024FS000000381 SPY_1000524_1001024:1-501
16 SPY_1000524_1001024:1-501 FWD_TILE2 SPY_1000524_1001024FS000000431 SPY_1000524_1001024:1-501
17 SPY_1000524_1001024:1-501 FWD_TILE3 SPY_1000524_1001024FS000000009 SPY_1000524_1001024:1-501
18 SPY_1000524_1001024:1-501 FWD_TILE3 SPY_1000524_1001024FS000000061 SPY_1000524_1001024:1-501
19 SPY_1000524_1001024:1-501 FWD_TILE3 SPY_1000524_1001024FS000000122 SPY_1000524_1001024:1-501
20 SPY_1000524_1001024:1-501 FWD_TILE3 SPY_1000524_1001024FS000000201 SPY_1000524_1001024:1-501

Total number of rows: 67188

Table truncated, full table size 6902 Kbytes.




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Supplementary file Size Download File type/resource
GPL11085_090910_MF_S_pyo_NZ131_expr.ndf.gz 4.3 Mb (ftp)(http) NDF
GPL11085_090910_MF_S_pyo_NZ131_expr.ngd.gz 72.6 Kb (ftp)(http) NGD

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